RCPedia: Genes

Summary

Gene Name	Rdh11	Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Mus musculus
Full Name	retinol dehydrogenase 11
Also known as	2610319N22Rik\|Arsdr1\|CGI-82\|HCBP12\|M42C60\|Mdt1\|Psdr1\|SCALD\|UBE-1c1\|Ube-1c\|ralR1
Coordinate	chr12:79221007-79238629
Strand	-
Gene summary	Enables aldehyde dehydrogenase (NADP+) activity. Involved in cellular detoxification of aldehyde; retinol metabolic process; and visual perception. Acts upstream of or within adaptation of rhodopsin mediated signaling. Located in photoreceptor inner segment. Is expressed in cerebral cortex ventricular layer and diencephalon. Orthologous to human RDH11 (retinol dehydrogenase 11). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rdh11

Retroname	Coord	Strand	Genomic Region	ENSG
Rdh11P1	chr6:48357808-48359035	-	Intergenic	ENSMUSG00000108275	UCSC

Expression

Transcript Sequences

>NM_021557.6
AGAAGCCATAAGTCCCGCTGTCCTCTTTAGAGCATCAACTTCAACTGCGCTTCGGTGGTGCTGAGATGTTCGGATTCCTGCTtctgctctctcttcccttcATCCTGTACTTGGTCACGCCAAAAATCAGGAAAATGCTGTCCAGTGGGGTGTGCACATCTAATGTTCAGCTTCCCGGGAAGGTAGCCATAGTCACTGGTGCTAACACAGGCATTGGGAAGGAGACAGCTAAAGATCTGGCCCAAAGAGGAGCCCGTGTGTATTTAGCTTGCCGGGATGTGGACAAGGGGGAACTGGCGGCTCGTGAGATCCAAGCCGTCACAGGGAACAGTCAGGTCTTCGTACGGAAACTGGACCTAGCTGATACCAAGTCTATTCGAGCCTTTGCCAAAGACTTCTTAGCTGAGGAAAAGCATCTGCACCTTCTCATCAACAATGCGGGCGTGATGATGTGCCCCTACTCGAAGACTGCAGACGGCTTTGAGATGCACATTGGCGTCAACCACCTGGGTCACTTCCTCCTGACCCATTTGCTGCTAGAAAAGCTGAAGGAGTCGGCCCCATCAAGGATAGTCAACTTGTCTTCTTTGGGACACCATCTGGGCAGGATCCACTTCCATAACCTGCAGGGGGAGAAGTTCTACAGTGCGGGTCTCGCGTACTGCCACAGCAAACTAGCCAACATTCTCTTCACTAAGGAGCTGGCCAAGAGGCTGAAAGGTTCTGGAGTGACAACATACTCTGTACACCCTGGCACAGTCCATTCTGAATTGACGCGGTACTCCTCTATTATGAGATGGCTTTGGcaacttttctttgttttcatcaaGACCCCTCAAGAGGGAGCTCAGACGAGCCTGTACTGTGCCCTGACAGAAGGTCTCGAGAGCCTAAGTGGCAGTCATTTCAGTGATTGCCAGTTGGCATGGGTCTCTTACCAAGGTCGCAATGAGATAATAGCCAGGCGGCTGTGGGATGTCAGCTGTGACCTGCTGGGCCTCCCAGTGGATTGGTAAGTGGTGGTTTGGACTCAAAAGAAGATTGGAGGAGATGATGATTATCCTTCAAAGTGGCCAAAACCTTGAACCTGAAGAGCGAAGAACTTCAAGCCTTTCCTGCTTGGCATCCAGTTAAATCCTAGTACACTGCCAGGTTCCTCGAAACCCCTTGAGTTTGTATTGACTTATTTTGTTCCTGCTCCTGCCAGCGTTTCTAGTGGTATCACTAAGACAGAGGACCTTCATGTGACCTACACAGCTCCTATTTTCCTTTGGAAACTCCCCCTAACCAGGAGCATGAAAGCCCTATGAAGATTGGTACATGACAATGTGGATTAGATGGAGCTCCTCCGAGCCGACCATCCTCTCCTTGAAGAACTCCATTGTAACCTCAGCTGAACCTCAGGAGTCCCGGAGCCTGGCTCAAGGGCAGGCAGGGCTTTGTGGTCCCAACATCTGGATACTTAAGAAAAGTTTTTACTAAATCTGGCAGTCTGAAGCTTTGGCTTCTGAGACACTTTTCTATGTCCAGACCACTGAAGAGCTTCCTTCTCTAAGAAATTTGTGGGATTTGAAGGGCagagataaaaataaagccaaactGTCATTTTCTCCCGCTGTTTCTCAGCCTAGTAAGGAGGTAATGAAAGGAACGGTATGAGACGATAGGTCACTGGGGTCAGTTACTGACCCCAGACCCACAGAGGCCTCTTTTTTGTGCCTTAGTTTCTcttaggaaactagaaaaggaaagGCCTTCTCATTGTCATTGTGTCGATTTTGTGTGTCTTCTTGTGCATTCATGCAGTTGAATGTGTTTCCACAaaattcacaatagccacaaaggAAAAGTTCTTAATCAGACTGTAGTGTAGACAAATTACCAGAGATGGGACAAATCACTGTGGAGTCTTTGAGTACAGTTGCAAAGCAAGGGAGACACTATCTGTGTTGTAATCGGTCACTGAGAAGCACAGATGCCGCAGGGaagaagtttaaaagaaaaatcctagGAGGGGACACATGATAATGAAGGGGTCAGCTGAGGATCTAAAACCATAACGGAAAGGCAGTAATAGACAGCTACAGAAAGGCACACTGTCTTAATCACCAGTCAGTCAGAGTGATAGGAAAATGTCCAAAGCACAAGAGTGAAATATTTCTCTATTCAGAAATGTTATCCTAAGGATTGGTAATTATAGTCAGTTCATAATCTTTTAGAGCATTTTCTTACATTAGCTTAACAAGATGTCCATTTCAGGAATGTGTATGGAGAGATGGGATGGCTTAGTAATgcctgctgttccagaggaccctggttcaattacTAGGACCCACTTGGcaaccacaaccatctataacctcAGTTATAGATGATCTAGAGGATCAGACAGCCTCATCTACCTCCACAGGCCCTGCAGGAATGTGGTGCatagatatatatgcaggcacacatacaaataattttgtaaaaaaaaaagaaatcaattttgACTTTGGGGGTATGCTCTCCTGAAATGTTGAggcccctgggtttgatcccagcactgcaaaagaaAGTAGAGATAGCCTCAATTTACTACGATTCTGCTTTATTTGGAGAGCTTTTATCAAAAGCAATGCAGACCAAGGGTGTCAGGAATCCCTCATGTTCCCATCACTGGTTTGGAGGATGCTATTCTAAGGGAGTTTGCCATTTCCTCGGGCTGACAATTATATTTTAAGCTTGAATATGTAAGACTGACAGGACCACAATCTTTAACTTCTAATAtttgtaaattaataaatttatgGGTTTGTTCTGACCAATAAAcgtattttaaaattagtttatggGGATATTGGAAAATTTTTGACAATGCAgtgattaattaaaataatatttcacttAATTTATATTCACTTGTCAATGAAAACAAAGGTTCTTTTC