Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Polr2k
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name polymerase (RNA) II (DNA directed) polypeptide K
Also known as ABC10-alpha|MafY|Mt1a|RPABC4|RPB10alpha|RPB12|RPB7.0
Coordinate chr15:36174156-36177158
Strand +
Gene summary Predicted to enable DNA binding activity; DNA-directed 5'-3' RNA polymerase activity; and zinc ion binding activity. Acts upstream of or within transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Is expressed in several structures, including cerebral cortex; nose; submandibular gland primordium; thymus primordium; and tooth. Orthologous to human POLR2K (RNA polymerase II, I and III subunit K). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Polr2k

Retroname Coord Strand Genomic Region ENSG
Polr2kP11 chr17:27099187-27099489 - Intergenic
ENSMUSG00000117903 UCSC
Polr2kP1 chr1:180681623-180682064 - Intragenic
ENSMUSG00000103979 UCSC
Polr2kP9 chr11:95652277-95652660 + Intragenic
ENSMUSG00000082981 UCSC
Polr2kP10 chr12:48679022-48679468 + Intergenic
ENSMUSG00000112005 UCSC
Polr2kP12 chr17:46405262-46405638 - Intergenic
ENSMUSG00000117109 UCSC
Polr2kP13 chr18:57252646-57252997 - Intergenic
ENSMUSG00000118177 UCSC
Polr2kP3 chr4:32655586-32656128 - Intergenic
ENSMUSG00000081592 UCSC
Polr2kP5 chr5:148550054-148550507 - Intergenic
ENSMUSG00000107098 UCSC
Polr2kP7 chr8:99605122-99605542 - Intergenic
ENSMUSG00000110011 UCSC
Polr2kP14 chrX:38058663-38059104 + Intergenic
ENSMUSG00000080896 UCSC
Polr2kP8 chr9:122771555-122771939 + Intergenic
ENSMUSG00000111428 UCSC
Polr2kP2 chr1:59696089-59696725 + Intragenic
N/A UCSC
Polr2kP4 chr5:123863209-123863652 + Intergenic
N/A UCSC
Polr2kP6 chr8:30023086-30023433 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001039368.2
GGAAGTTGGCGAGGCAGCGCCGGAAAAAGCTTTTGCGTGCTCAGAGAAGGGACGCTTCTTCCAGCTGTGGAGGTAGGGAGTCTCCGGCTGATGATTTTGGAAGTAAATTTGTGGCAAAACCAGGAGAGACACTTGGCTTTAAAATCTTTGTGGGCAGCCGGGAGAGGTAGCACACTCCTGCCATTTGAGCGCttggaagcagagGCACTAACAATGGACGCTCAGAAAGATGTTCAACCACCAAAGCAGCAGCCAATGATATATATTTGTGGAGAGTGTCACACCGAAAATGAGATAAAGTCCAGGGATCCCATCAGATGCAGAGAATGTGGATACAGAATAATGTACAAGAAAAGGACTAAAAGATTGGTGGTTTTTGATGCTCGATGAAATGTGGGAGTTCAGAAGTATCTTCATTCATACATTTGCCTCATTGATGTTTCTCTTTAATGTATAGCATTTGGCTTAGTTTACTTAATGAAAACAACTGTATGCCTATGATTTCATTTAGAAATACAATTGTATTTTAATActttgtataaaggaaatttTGGTTCAATATATGGCTTAATTTATTGCTTTTGTAATCCGTCACACAGTGAAGATTAAAAGTGTTTCCTCAAACC
>NM_023127.3
GGAAGTTGGCGAGGCAGCGCCGGAAAAAGCTTTTGCGTGCTCAGAGAAGGGACGCTTCTTCCAGCTGTGGAGGCACTAACAATGGACGCTCAGAAAGATGTTCAACCACCAAAGCAGCAGCCAATGATATATATTTGTGGAGAGTGTCACACCGAAAATGAGATAAAGTCCAGGGATCCCATCAGATGCAGAGAATGTGGATACAGAATAATGTACAAGAAAAGGACTAAAAGATTGGTGGTTTTTGATGCTCGATGAAATGTGGGAGTTCAGAAGTATCTTCATTCATACATTTGCCTCATTGATGTTTCTCTTTAATGTATAGCATTTGGCTTAGTTTACTTAATGAAAACAACTGTATGCCTATGATTTCATTTAGAAATACAATTGTATTTTAATActttgtataaaggaaatttTGGTTCAATATATGGCTTAATTTATTGCTTTTGTAATCCGTCACACAGTGAAGATTAAAAGTGTTTCCTCAAACC