Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Naca
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name nascent polypeptide-associated complex alpha polypeptide
Also known as Gm1878|mKIAA0363|skNAC
Coordinate chr10:127869144-127884506
Strand +
Gene summary Enables TBP-class protein binding activity and transcription coactivator activity. Involved in several processes, including heart development; negative regulation of striated muscle cell apoptotic process; and positive regulation of skeletal muscle tissue growth. Acts upstream of or within myoblast migration. Located in cytoplasm and nucleus. Is expressed in several structures, including aorta; genitourinary system; gut; liver; and spleen. Orthologous to human NACA (nascent polypeptide associated complex subunit alpha). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Naca

Retroname Coord Strand Genomic Region ENSG
NacaP4 chr12:96889067-96889821 - Intergenic
 ENSMUSG00000043483 UCSC
NacaP5 chr15:23623899-23624286 - Intergenic
 ENSMUSG00000115788 UCSC
NacaP3 chr9:43108683-43108833 - Intragenic
 N/A UCSC
NacaP1 chr1:82993071-82993757 + Intragenic
 ENSMUSG00000100432 UCSC
NacaP2 chr4:52821452-52822242 + Intergenic
 ENSMUSG00000081975 UCSC
NacaP6 chr18:59470701-59471128 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001282976.1
aaagaggaaacccgGACGCCGTCCTAAACAGCTGTAGCTGTTTCGCATACGGTCTTGGCGCGTCCCTCGGGGTCAAGGCCATGACGGGGCGGCCCCTACCGCCCCAGCCAGGCCCGCGCGTCCTCTTCGGAATTCATAGCCTTATTTAGACCGCGCCACCGCCGTGCCCGTGAGAACAGCTGCTCGGCTGGCTACAGGAAGTAGAGGCCCGCGCGCCTGACCCGGAAGCGCATGCTGGTCCCGCCCTCTCGGCGCCCGGCTTCCTTCTGCAACAGGCGTGGGTCACGGGCTCGCTCGTTCTCTTTCTGCCGCCATCTTGGTTCCGTGATCTCCGCACAgtttgttttgtttgtttgtttgttttcggaaTACTTGACTAGGCGGAATCCTTGGGCTAGGCAGGTGAATCCGCCCGAGTTAATTCGGGGCCTCCGTTTTATTCCCTTCAGAAATGCCCGGTGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCACAGCCTCAGGCTGAGACAGGATCGGGAACAGAGTCTGACAGTGATGAGTCAGTACCAGAGCTCGAGGAACAAGACTCCACACAGACGGCCACGCAGCAAGCCCAGCTGGCAGCCGCAGCAGAGATCGATGAAGAACCTGTTAGTAAAGCCAAGCAGAGTCGAAGTGAGAAGAAGGCAAGGAAGgCTATGTCCAAACTGGGTCTTCGACAGGTTACAGGGGTTACGAGAGTCACTATCCGAAAATCTAAAAATATCCTCTTTGTCATCACAAAACCCGATGTCTACAAGAGCCCAGCTTCAGACACCTACATAGTGTTTGGGGAAGCCAAGATTGAAGATTTGTCTCAGCAAGCACAGTTAGCAGCTGCTGAGAAATTCAAAGTTCAAGGTGAAGCTGTTTCAAACATTCAGGAAAACACTCAGACTCCAACCGTCCAAGAGGAGAGTGAAGAAGAGGAGGTTGATGAGACGGGTGTGGAAGTTAAGGACATAGAACTGGTCATGTCGCAAGCAAACGTATCAAGAGCAAAGGCTGTTCGAGCCCTGAAAAACAACAGTAATGATATTGTAAATGCTATTATGgAATTAACAATGTAACTATTTGACAGCGAAGACaactccccctttcccccctttttggTGTTTGAAAAGTGGAACTACAGCTTGGTTTAAAATTTGTACTGTTTCTATCACTAATAAAGTTGTGGCTTCTTGTTGGATGGACTCA
>NM_013608.3
aaagaggaaacccgGACGCCGTCCTAAACAGCTGTAGCTGTTTCGCATACGGTCTTGGCGCGTCCCTCGGGGTCAAGGCCATGACGGGGCGGCCCCTACCGCCCCAGCCAGGCCCGCGCGTCCTCTTCGGAATTCATAGCCTTATTTAGACCGCGCCACCGCCGTGCCCGTGAGAACAGCTGCTCGGCTGGCTACAGGAAGTAGAGGCCCGCGCGCCTGACCCGGAAGCGCATGCTGGTCCCGCCCTCTCGGCGCCCGGCTTCCTTCTGCAACAGGCGTGGGTCACGGGCTCGCTCGTTCTCTTTCTGCCGCCATCTTGGTTCCGTGATCTCCGCACAAAATGCCCGGTGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCACAGCCTCAGGCTGAGACAGGATCGGGAACAGAGTCTGACAGTGATGAGTCAGTACCAGAGCTCGAGGAACAAGACTCCACACAGACGGCCACGCAGCAAGCCCAGCTGGCAGCCGCAGCAGAGATCGATGAAGAACCTGTTAGTAAAGCCAAGCAGAGTCGAAGTGAGAAGAAGGCAAGGAAGgCTATGTCCAAACTGGGTCTTCGACAGGTTACAGGGGTTACGAGAGTCACTATCCGAAAATCTAAAAATATCCTCTTTGTCATCACAAAACCCGATGTCTACAAGAGCCCAGCTTCAGACACCTACATAGTGTTTGGGGAAGCCAAGATTGAAGATTTGTCTCAGCAAGCACAGTTAGCAGCTGCTGAGAAATTCAAAGTTCAAGGTGAAGCTGTTTCAAACATTCAGGAAAACACTCAGACTCCAACCGTCCAAGAGGAGAGTGAAGAAGAGGAGGTTGATGAGACGGGTGTGGAAGTTAAGGACATAGAACTGGTCATGTCGCAAGCAAACGTATCAAGAGCAAAGGCTGTTCGAGCCCTGAAAAACAACAGTAATGATATTGTAAATGCTATTATGgAATTAACAATGTAACTATTTGACAGCGAAGACaactccccctttcccccctttttggTGTTTGAAAAGTGGAACTACAGCTTGGTTTAAAATTTGTACTGTTTCTATCACTAATAAAGTTGTGGCTTCTTGTTGGATGGACTCA