Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ncl
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name nucleolin
Also known as B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl
Coordinate chr1:86272441-86287177
Strand -
Gene summary Enables RNA binding activity. Acts upstream of or within cellular response to epidermal growth factor stimulus; cellular response to leukemia inhibitory factor; and positive regulation of transcription by RNA polymerase II. Located in nucleolus and nucleoplasm. Is expressed in several structures, including 1st branchial arch mandibular component; blastocyst; central nervous system; early embryo; and tooth. Orthologous to human NCL (nucleolin). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ncl

Retroname Coord Strand Genomic Region ENSG
NclP1 chr1:18332491-18333594 - Intragenic
Intragenic
ENSMUSG00000101685 UCSC
NclP3 chr11:18275504-18277803 - Intergenic
ENSMUSG00000081302 UCSC
NclP2 chr7:136974416-136974853 + Intergenic
ENSMUSG00000109843 UCSC

Expression

Transcript Sequences

>NM_010880.3
CGCGAGCTCTGGTTGGTGGAGCCGAAGTCACGAGGACCCCCTTCGTCGCCTTTCCAGAGGCGATTACTGGGCAGGCTCAGTCTTTTGCCTCAGACGCTAGCTGTAGCTGGCAGGCGGTTGTACGTGCTCCAGAGTCGTCGGTACCCGCTACTGCAGTCGCTTTCGTGTGGCTTCCGCTGAGCTCTTCCGAGCTGCTCGCTCTCCACACGCGCCGCCGCCGTAATCCGCCACCATGGTGAAGCTCGCAAAGGCTGGCAAAACCCACGGTGAGGCCAAGAAAATGGCTCCTCCTCcaaaggaggtggaagaggatagtgaagatgaagaaatgtcAGAAGATGAAGATGACAGCAGTGGAGAAGAGGAGGTTGTCATCCCTCAGAAAAAAGGCAAAAAGGCTACCACAACCCCAGCAAAGAAGGTGGTTGtttcacaaacaaaaaaggctgcAGTTCCCACACCAGCTAAGAAAGCAGCTGTGACCCCAGGCAAAAAGGCAGTAGCCACACCAGCTAAGAAAAACATTACACCAGCCAAAGTCATTCCAACACCGGGTAAGAAGggagctgcacaagcaaaagcgTTGGTACCAACTCCTGGTAAAAAGGGAGCTGCCACTCCAGCTAAGGGGGCTAAGAACGGTAAGAATGCCAAGAAGGAAGACAGTGATGAGGATGAAGATGAAGAGGATGAAGATGATAGCGATGAGGATGAAGAtgatgaggaagaggatgagTTTGAGCCACCAATAGTAAAAGGAGTGAAGCCAGCAAAAgcagctcctgctgctcctgcctcagaggatgaggaagatgatgaggatgaagatgatgaggaagatgatgatgaagaggaggaagatgACTCTGAGGAAGAAGTTATGGAGATCACAACagccaaaggaaagaaaactccTGCAAAAGTTGTTCCTATGAAAGCCAAGAGTGtggctgaggaggaggatgatgaggaagaggatgaagatgaCGAGGATGAGGATGATGAGGAAGAGGATGACGAAGAtgatgatgaggaagaagaggaggaagAACCTGTTAAAGCAGCACCTGGAAAACGGAAGAAGGAGATGACCAAGCAGAAAGAAGCCCCTGAAGCCAAGAAACAGAAAGTAGAAGgCTCAGAACCAACTACACCTTTCAATCTGTTCATTGGAAACCTTAATCCAAACAAGTCTGTTAATGAATTAAAATTTGCCATCAGTGAACTTTTTGCTAAAAATGATCTTGCTGTTGTGGATGTCAGAACTGGTACAAATAGGAAATTTGGTTATGTGGACTTTGAGTCTGCTGAAGACCTAGAAAAGGCCTTGGAGCTCACTGGTTTAAAAGTGTTTGGCAATGAAATTAAactagaaaaaccaaaaggaagagaTAGTAAGAAAGTTCGAGCTGCAAGAACACTTCTAGCCAAAAACCTCTCTTTCAACATCACTGAGGATGAATTAAAGGAAGTGTTTGAAGACGCCATGGAGATCAGATTAGTCAGCCAGGATGGGAAAAGTAAAGGGATTGCTTATATTGAATTTAAGTCTGAAGCTGATGCAGAGAAAAATTTGGAAGAAAAGCAGGGGGCAGAAATTGATGGACGATCTGTTTCACTCTACTATACTGGAGAGAAAGGTCAAAGGCAAGAGAGAACTGGAAAGACCAGCACTTGGAGTGGTGAATCAAAGACTTTGGTTTTAAGTAACCTTTCCTACAGTGCAACAAAAGAAACTCTTGAGGAAGTATTTGAGAAAGCAACTTTTATCAAAgtgccccagaacccacatggcaaacCTAAAGGGTATGCATTTATAGAATTTGCTTCATTTGAAGATGCTAAAGAAGCTTTAAATTCCTGTAATAAAATGGAAATTGAGGGCAGAACAATCAGGCTGGAGTTGCAAGGATCCAATTCGAGAAGTCAACCATCCAAAACTCTGTTTGTCAAAGGTCTGTCTGAGGATACCACTGAAGAGACCTTAAAAGAATCATTTGAGGGCTCTGTTCGTGCAAGAATAGTCACTGATCGGGAAACTGGTTCTTCCAAAGGgtttggTTTTGTAGACTTTAATAGTGAGGAAGATGCCAAAGCTGCCAAGGAGGCCATGGAAGATGGAGAAATTGACGGAAACAAAGTTACCTTGGACTGGGCCAAACCTAAGGGTGAAGGTGGCTTTGGTGGtcgaggtggaggcagaggaggtttcggaggcagaggtggaggcagaggtggaagaGGTGGATTTGGAGGAAGAGGCCGGGGAGGCTTTGGAgGTAGAGGAGGCTTCCGAGGcggcagaggaggagggggagacttCAAGCCACAAGGAAAGAAGACGAAGTTTGAATAGTTCCTTCCATCCCATTCTTTCcctcttcattttaaagaaaggaCTCTGGGGTTTTTACTCTGTTACCTGTTCAATGACAGAGCCTTCTAAGGACATTCCAAGACAGTAAAGATCCTAAACTCTGTTGCCAGACTTAATACTTCCTAGAGGTTACATTTGGATTGTTGCTTAAGAGCTTGGCAAGACCAACTCTGCCCAGTGGGAATTTCAGTTGTGTTCCTACTGCTTTCAAGAATTCCCAGCTACAAATGTGGAAATTGGTGGGGAACAGCTTCATCATGATTCTGATCTGGAAGATTTAATTTGTATCTTAGAAGGGTGTGTACTGGAAAAGTGGTTGATAGAGCACATGGATCAGTGCTGGAAATACCATACAAGAGCTTGTGTGGTATGTAATTCTATTCCCAGCATAATAAGAACAAACAGTACAGTGCAATCTGAAATGACCTGGACAAGGAATGGTACCCCATTGGGTTGAAAAATTCACATAGCCAGGatggttgcacatgcctttaaccccagcacttgggagggagaggctggtagatctgagtttgatctggtgtacagagagttccagaacagccagggctgtttattagagaaaaaaccctgtcttgaaaaaacaagaaaaaaaaacctcacagacAACCAAATACAGAGTTTTAGCCACTGAGTACCAAGTCTCAGCAGCAAGCTGGGAGTGACGTAATCCAATCCCATGGGAGGCTAAAGCAGTCTATGACTTCAATGCCAGTTGGGTCTGCAGAACTGAGTTGCTGGATAGTGAGGGATACttagaaactttgtcttgaaaaaaaaaacaagacctgTCAAATTTGAGAGAAGCTTTGGGAAACAAGGTTTGTAAGTTCCAACAGAGGGAACAGTGGCCTTTTTGACTTAAAGGTTGTCAGAGGTCCAGTTTAACTAGGGATAATACAGTGGCCCTTGGCCTGTGTACTTAATGAATTTTTCAGTGATCTATCAaggatgtttggtttttttgttttttgtttgttttgtataagGCATGGGTGCCTAGATAACCTTAATAGAAACTTTCCTGTAGGTGTTTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAAAGACCCTCTGTAGGGTTGCGCTTAGCACCTGTCTGGTGGCTTGAGTATGTGGTATGACCATTGCAGTCGCAGTCCTGTCTAAAAGTGAGGATGGCGTGGGCATTAGATTTGTGTAGCAGGGAACAGTTTGGTGGGTTCTTTTGCTGTGGGGAGTGGAGCCCTTGATTATGTTAACCTCCTTGTTAAAGATTAATGGCATGTAGCTGAAGGCACTCAGCTGTCATTAATCCTAGAAGGCAGACCAATTTGAGGCTAAGGAATTCCAGaatagccagtgctacacagaagaCCCCCAAGACTACAATAGCAAAGGAAAGGTTCAACTCTGGTGCTAGCAGACATCATTTTTTTGTGGATTGAGGACATAGTTAACCTATAGGATCATCAGAAGATTTACAGTTGAATAGCTCTCCCTAAACGAGGCAGACATTTTAGAAAAGCAGCAAACCTTTCTGGAAAtggttgtttgctttcttttctcattcttcCAGCAGGTGGCAACATGAGAACTGAAGAAAGGGTGGAGGGAAGGCAGTTAATCTGCCTTCACCTAATAGATAAACACAAAGCTCTTATTCTGGTGGTAGAGTAGCTTGTAGAGGTCTTTTAAAGAGCAACAAAGCTTTCTCATTTGAAAGATTCacttcagctgggcgtggtggcgcacgcctttagtcccagcacttgggaggcagaggcaagtgattttctgagtgagttcgaggccagcctaggtctacagagtgagttctaggacagccagggctacacagagaaaccctgcctcaaaaaacaaaaagattcacTCCTGACCATTTATCACCTGCTTTTGACTATACACTACCCCTTCAGTGTGGCTTTTTTCCTACGGATGCTAGTGATAGGAGTTACCTAATGTAGTTTTCAGTTCAATCTGCCTGAACCTTTTCAACTCTTAAGGAACATAGGCAGATGCTAAGGGTGTAGGTCTTGACCCTATACTGAGgtagaaaggaaggggaaatggaaGAGGAGCATGTACTCTTTACTTCTAAGCTGGATCTATAGCCTTAGGATTACCATCTATAACAGGCTAATTTCATTCAGTTAGTGGTAAAACCCTTTGCCATAGAATAAAAGGGCTCTCAAGGTTCTAGTAGTAAAACAAGTTTTGGTTGCTGTCCTCCATTAAGTGCCTACTAAATGATAAGTGATGGAGAGGATGGAACTGATTCCAAGAAATACTCAACAGTGAGGACTTATAGGCCActtaacctgtgtgtgcttgtgggatATTTCTaccttttgaagcagggtctcttatTTTCTTACTCACTACAAGCTTTCAAGTACTTCTGGCAATACGAATGGGATTAGCAATGCATGCCATTTCAGTGGCCTTATCTGGGTTTCAGGGGTCCTGGTCATCAGGTTCTCGCTGGTAAATCTTAAAGACcaccgtcttttttttttttttttttttgagacagggtctttagcTCTGTGGCCATCATGGAACTCAAtaggtagactaggctgacctcaagatgtctgcctcttgagtgttgcattaaaggcctgtgccaccatgtcaGGCTCCATTATAGAAACACACTACTATCAGAAGGATGATAGgctgaggcccattttttaaccctttgaaaaaaattctggctgggcagtggtgacactgcctttaatcccagcacttgggagacaggcaggtggatttctgagttcaaggccagctgggtctatagagtaagttccaggacagccagagctatacagagaaacaaaaaaaaaacaagggtttattggggagggaagggaagtacTTATTTTGAATAAGGTTTTATTGTGTATCCCTGATTGTCTTTGAAATTAATTTGCTTCAACTCGAAGTGCTGAGACTGCAAGTATGTACAACCACAGTACTCTTAGGTTCTAACTGAATTCTCACCCATTATTTTTCAAATACGGCCTTTCAGTTTTATTCTCTACTGGACTCTTAGATAACCAGATACTGGCATTGAAActagtttttttctctttgaatatTAATTTGGATACATTCTATTGTTTTGGATTCTAGTTCACTGATTCTTCTGTTAGGCCCTTTAGTGAAGCTTTCAGgtgtctttagtttttttttaatttgtgtgtgtgggtatagTGTCTGTATTTCTCCATGTGCATGCAATGccacaggaggccagaagagggtggatcttccaaccttttttttttttttaaagatttttattttatgtatatgagtacactgtagctgtcttcagacacaccagaagagggcatagaatcccattacagattattgagagccaccatgtgattactggggattgaactcatgacctctgaaagagcagtcagtgctctgaactactgagccatctcaccagccgccTTCAAGTtcttgtgaaccaccatgtgggtactgtgaATCAAACTTGTGTTTTCTggactcttaacagctgagtcatctctctagcccttcaagtgtttcctttctcttctagGTTTCCAGTTTATGAAGCCCCCATTTTGTCATTTAAATTCTTTTCCTGCAAATTCCTATACATCTACAATCATTGAAGTcatttgtaaatttttttatgtgcattagtaTTTGGTCTTTATGTGTGTGAGGAGTCAGACCCACCatgttacaaacagttgtgagctgctatgtgggtgctgggaattgaacttgggtcccctggaagagtgaCCAGTGCCCTTAAGTCGCCCCTTATTTGTAGTTTTAACAGGAGTTATGGTTGAGTACTTGTTAGGATTATGAAGAGTTGTTTCTCTTTCATTGCATGTCTAAACTGGACATTGACCCATATTTAGAGGCCAGCCATGTGCTAATTCAAGTACATTTTGTACTGGCATTCTTAAGTAGCTAGCAAAATCTGAGTTTCTGTTTTTCATAGAATATGATGAGATTTACTTTAAAGCCAGGTAATGTGTTTATCCTGAGAATACCAGCTGTGTATTTTCTTGAGCCAACCAAATTGAAAGTGAGGAGTTTCAGTGATTAAACACTGGCTGTTTACATGCAGAGAACCccagttcacttcccagcatccagatGCTGCTTGACTGTAACTAGTTCCAGGGACCCAAGGTCCTTTTCTGCTTTTTGGGCACTTTCTTGGGTGctagcaaaacacccatatacataaaaatgaataggaaaatgaaaaatttaggaaaagTTGGAAGCGATTTTATGTCAAATTTACTGTTCCTGTTCATGGTCCCCCCCAAACTTCCAGACTCACTCCTCAGTACCCCTCTGTTGCCCAGAAATCCGGCTAATCTTGGCACACCTGTAGCGCGCCAGACTAAACACTGACTTTGAGAGTATGTGCCTCAGTTCTATCTGGTAATTATTTTTATGGTGCTTGGAATTAGACCAGGACCTTGGTTTGTACATATAATTAGGTGATTGCAGTTTTTCTtgactttggtttttttgtttttttcctttacatttctgtcagatttctgtttttttgagacagggtctctctcactatgtagctttggttatcctagaacttactattTAGACCAGCTGGCCTTTAATTCCCAGAGGTTCAttcacctctgccttctgagtgctggcatcaAAGAGAGTGGATTCGTAGCTGTTAATATCAGCTATAAACTTGATCAGATTGATAAGTGTCTAGGGCACTAGGGAATTACTCTACATGTTGCTATAACAGAATACCTGACCAAAGCAATTTAAAGAAAAGGGGTTTATTTTGATTCACAGTTCCAGAAtatagtccatcatggcagggacaAGGACGACATGATGCCagaagcttgaagcagctggtcacattgcatctataGTTAGAAAAAGTTGATGGATGCTTGTATTCAGCTAGCTTTCCTTTCCATGCAGACTAGGACTCCAACCTAGGGATGGTTTTACATACCTGAGGTAATTCAAGATAATCTCATAGGCATAGCCAGAAGTTAACCTGATCTAGATAATTTCCTACAGATATGCTTAGAAGCGTGTCTATTTCCTTCTAGATCCAGTTCAGTTGACAATGTGGTTTGGCATactctagggtgtgtgtgtgagtatttccAGAAAGGACTAGCTGAACTACAAACACTCACCCTAAGCCATGAAATCTGGGGcatggtggctgggatttgaactcaggacctttgctgAGCCATCCACCAGCcccaagtttctctgtgtagccctggctgtcctggaactcactctgtagaccaggctcagagatctgcctgtttctgcctcccaagtgctgggattaaaggtgtgcgccgccacCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTCTATTCTATCATAACACTCCCAGTGTCTAATCATTTGGAAGGGTGccatctctagtttcttttcccatatcaaagaaagtgcaaattTTTTAGGGGCATCATAATGGTAACTTGGACATTAATTAGGAAGAAACTGCATTTGTTGGTTAAAAATATCTGTAAAGGGGGCCAGTGAGTTCAATtagtaaaggtgcctgccaccaaacctgacagcCTGTGTTTGATCTCTAGAAGATGTAAAAGCTGAAGGAGAGAAACAATAGGTTTGTCTGGCCTCTCTGTAGCAAGCATGTACCTGAACATGCATATCACTCATACAGTAATTAAACATCGGAATGATTCACATCCACAAGGTAAACTATGGGAAGGATAAACCTCTAGTAAACATGTC