Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Nup50
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name nucleoporin 50
Also known as 1700030K07Rik|Npap60
Coordinate chr15:84800100-84827164
Strand +
Gene summary Acts upstream of or within neural tube formation. Part of nuclear pore. Is expressed in several structures, including nervous system and retina. Orthologous to human NUP50 (nucleoporin 50). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nup50

Retroname Coord Strand Genomic Region ENSG
Nup50P1 chr2:37096961-37098085 + Intergenic
ENSMUSG00000083815 UCSC
Nup50P2 chr6:96141719-96142056 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_016714.2
GCCCCGGGCGCTCTCTTCACCGTTCTGTAGCAGCTTCGGGCTGAGCGGATGTCTCTTCTTGTCCTCAGTGTCGGACTCAGAGACACACGGCTCCCGAGTTCTGCTGATCACGAAGTTCCCGGAGGCGCTCGACGCACCGGAATCTCCCAGCGGCCGCGACCGCCGCCTCGGCCCTGCTCGCCGCGGCGCCGGGACTCCAGCGTGATCGGCGGCGGCAGTCAAGGTTCACAAAAATGGCGAAGAGAGTTGCGGAGAAGGAGTTGACTGACAGGAACTGGGATGAGGAAGACGAAGTTGAAGAGATGGGAACATTCTCAGTGGCCAGTGAGGAAGTCATGAAGAACAGAGCCGTAAAGAAGGCAAAGCGCAGAAACGTTGGATTTGAATCTGATAGCGGAGGAGCCTTTAAAGGTTTCAAAGGTTTGGTTGTGCCTTCTGGAGGAGGAGGGttttctggatttggtggctCTGGAGGAAAGCCTCTGGAAGGACTGACAAATGGAAACAGCACAGACAATGCCACGCCCTTCTCCAATGTAAAGACAGCAGCAGAGCCCAAGGCAGCCTTTGGTTCTTTTGCTGTGAATGGCCCTACTACCTTGGTGGATAAAAAGATTTCAAGTCCCAAATGCAATAACAGCAATCAGCCGCCCTCCTCCGGCCCTGCTTCCAGTACCGCCTGCCCTGGGAATGCCTATCACAAGCAGCTGGCTGGCTTGAACTGCTCCGTCCGCGATTGGATAGTGAAGCACGTGAACACAAACCCGCTTTGTGACCTGACTCccatttttaaagactatgagagATACTTGGCGACGATCGAGAAGCAGCTTGAGAATGGAGGCGGCAGCAGTTCTGAGAGCCAGACAGACAGGGCGACGGCTGGAATGGAGCCTCCTTCCCTTTTTGGTTCAACAAAACTACAGCAAGAGTCACCATTTTCATTTCATGGCAACAAAGCGGAGGACACATCTGAAAAGGTGGAGTTTACAGCAGAAAAGAAATCGGACGCAGCACAAGGAGCAACAAGTGCCTCGTTTAGTTTCGGCAAGAAAATTGAGAGCTCGGCTTTGGGCTCGTTAAGCTCTGGCTCCCTAACTGGGTTTTCATTCTCTGCTGGAAGCTCCAGCTTGTTTGGTAAAGATGCTGCCCAGAGTAAAGCAGCCTCTTCGCTGTTCTCTGCTAAAGCATCCGAGAGTCCGGCAGGAGGCGGCAGCAGCGAGTGCAGAGATGGTGAAGAAGAGGAGAATGACGAGCCACCCAAGGTAGTGGTGACCGAAGTAAAGGAAGAGGATGCTTTCTACTCCAAAaaATGTAAACTATTTTACAAGAAAGACAACGAATTTAAAGAGAAGGGTGTGGGGACCCTGCATTTAAAACCCACAGCAACTCAGAAGACCCAGCTCTTGGTGCGGGCAGACACCAACCTAGGCAACATACTGCTGAATGTTCTGATCGCCCCCAACATGCCGTGCACCCGGACAGGAAAGAACAACGTCCTTATCGTCTGTGTCCCCAACCCCCCACTCGATGAGAAGCAGCCCACTCTCCCGGCCACCATGCTGATCCGGGTGAAGACGAGCGAGGATGCCGATGAATTGCACAAGATTTTACTGGAGAAAAAGGATGCCTGAGCACTGAGGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATTCTTTCCTCTTCTACTGTGACATTCTGAGAACTTCTAGGTAACTTGAACTTTTGTGAGGAAGATTAAGGCCAATAAATCCTTTCAGTGTGTCGAAGCTCTTCTCCCTTCCTAAGAACTAAGCAAAATACATTGGAGTGAAAAGTGTGGGAAGATGGTTTTTAATGTTGATTCATTGAGTAAACTAACCTAAGTGATTCTTAATGGACTATAATCAGGGTACCAGTTAGCTCTCCAAAGGCTCCCTCAGGCAGCAGTGGTGCCGCTCTCTGCCTTCCCCAGGAGACCCAGTGTTCCTGAAGACACCGCCCGTTTCCTTCCTGTGGGCTTGTCTGACCATGACTAGCACTCCTGCCAGACAGCACACCGCCACACTGTGACCGACCGCGCTTGCCCATTCCTTCTGAGCTGACTGGGTACTGGGAATCTGTCGTCAGCCTGTCTCGGCTGGTGCTGGCCTTTGACCTGGAGCTGCTTGACTGAACCAGGAACCGCCTTTCCATGGGAAAGACCATGAGTGGTGGCTCGTGGGGAGCTGGCGGTGGACAGACTGGGTCTGGAGTTTATCCATGAGGTGCTCTTACTAGCTTTCCTCCCTAGTTAGCATGGACGGGGGCTGTCAGGAATAATGGATTTTATTAAAAGCACAAATTTGGTAGTGTTTTTATATCATTTCTATACCACAAATAagcctttattttaaaagaaaaaagtgaaatcGTGCTGAAAAGGGTTGTGTGCTCATGGCCGTTTGTGCCCTGCTGAGCCCTGGTGGGCACAGTCTGAATGGAGTTCTCTCACGAGCCGTGTGCTCATGAGAAGCAAGAGTATGGGAGTGGAAGACGGCTCATTTGGCCCGTAGCTTCAGACAGCAGCATATTATTTGGCGtctgaagaaaacatttttatctttacTTTTTTAAGGATGAGGTATTATTGAGTATGTCCATTTGGAAGAGAGCCATGGTTCTACACGCTGGTCATGTTACCTCAGAGCGGTGAGGTTGCTAATACTAGTATTCTCTGAAGACCAGACATGGGTTAAATTCGAGATTTGATGACGAGCTGGTCATGGTTCCTGTCTAATCCCGGTGCtggaaaagctgaggcaggaagatcatttgAGTTCACAGCAGCTTGAGCTACTGTAagacacctcccccacccccaataaaatCAAATAGAATAGAAAGTTTGACTCTTTAAAAGTCCACTTGCATTTCTCATAAAACCATTTGACACTAGGACCAGATCTTGTCTGAAGGCTCAGGGTCAGTACCCAGGGGCGCACACTTGTGTGATCAGGTTCCGACAAAAGCTGGGTGGCACAGTTGCTTTCTTAAAGCTGCCGTGCTAGGTGGGATGAAACCTGGTTAACTTTTATTTTCACATGGGTcttagtctcactatgtaaccctggctagccttgaactcagatccacctgcctctgcctcctgagcccaGAGATGTTCTTGAGGTGGGGTGACAGTGCTCTGTGCATTTTGGCACGTATCTGCAGATGCATGTTTGTGCTTCTTGGGCTGTGGACCTAAGGAGATGCTGtgcggtttggtttggttttgccttgTAGCATGGAGAATTGGTTCCTAGCAAGCAGGTTGCTGCTTCTgttggccctggccctggcttcTTCACATTGGGCTTCCCAGCTTTCCAAAGATGAAACAAGGGGTGTGCATTTCAGAACAGTACTGTGTAGCCACGTGCCTGTGGGGCTGACACGTGTCAAACTCACAGGCACTTTCAGGAACTTGTCTCTTCATGGTGGCAGTGCTCTGTGAGCATCTGCCCATGCCTTGAATATTTACcaaaagaataaaagcaaaaaagatCATGACTGGACTGCCTTCTAGAGCTCCCCGGCCAATTTCAGTTGTAAATTAGTGAGGgtggcttgcttttttttctaaCATTCCAGCAATTTGCTGCTAAAGACTATCACTTTTGGAAACAAGAATTACAGGGGAGATGTGTGGGGTGTGACTGTAACTCGGTGTCTTGTCTTTATGCTTTAGGAGCTAGCTCATTGCATCTGACCTGAGTATGGGAATCACTATGAAGTCTGAGTGTCACAGGGAGGCCCCCGGAGGGCACTCTGTTcttcttccactgtgtgtgtAGCTGGTTCCAACCCATGGCTTAAACTTCATTTATGGTTTAACGTGTTAGAAACTTGCATCTTGTCTGTTTAATGTGAACTGAGGTGTGTATCTCCAGTTTGAAAATCTCACGTTGTGTCTTACATTTGCCTGAAGGAAGTGTGTGTTCTCTGTGGTCAGGGTGCATCTGGCAGATGCTAAGCCTGGGCCTTCCCACACTATAGCTCACACTATGACACATTCCCAGCCCTGCCATGTCCTCCTCAGAGAGCCACACTGTACAGGCTGTGTCTGTGTCAGTGACAGGTCCGACTGTTGGTGGGCTGATGCTCTGTTTTACCATTTCAGTTCTGAATCCTGTTTTTTTACATGCTGTgtgccaaaaaccaaaacaaaccaacaacaacaacaaaaaaaatacctCCTATGGCATAGAGGGGAATTCACCTTGCTGTCAGGGAAAGCCGTTTCCCTACCTTTTGAACATTACGAAGTCTGTTCTTGCCAGTTTCTTCATTATGTTACTATCTCTGAAGATGAGAAACAGCCCCTTGAGGCTGCAGAGTACCCACTTAGACCACTGGAGTGGGATTTTAAGGAGATGGCCTGCTCTGTCACTTGTAGGTGAGGTTGGGAGTTCTTCAGGGCGTCTTTCTAGCCACATGCTCTGTACACAGCCACCAAGTGCTCTCCAGAAGCAATCACAAGCCTGAGGACTGTCCCTTAACACAGATTTGTAAAAGTGACGTCAGACTTCGTAGCCAGCACATGGAGTGATCCGCCTTCTACTCGGAACGGGAACTTGTTTTCTCCAGCTAAAATACTTGAATTGTCAGGCAGTGTAATCTCAGTGTGTGTTAGCTTTTGAATGAGCCTTTAAGGAAGTGTAACAATCCATGAAATGTGAATAAATGGAAAGTTGAAAAACCA