Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Odc1
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ornithine decarboxylase, structural 1
Also known as ODC
Coordinate chr12:17594809-17601503
Strand +
Gene summary Enables ornithine decarboxylase activity and protein homodimerization activity. Involved in putrescine biosynthetic process from ornithine and regulation of protein catabolic process. Acts upstream of or within kidney development and positive regulation of cell population proliferation. Located in cytosol. Is expressed in several structures, including alimentary system; cardiovascular system; genitourinary system; nervous system; and sensory organ. Used to study atrichia with papular lesions. Orthologous to human ODC1 (ornithine decarboxylase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Odc1

Retroname Coord Strand Genomic Region ENSG
Odc1P7 chr12:115955799-115957310 - Intergenic
ENSMUSG00000106239 UCSC
Odc1P2 chr4:98552586-98555083 + Intragenic
ENSMUSG00000081046 UCSC
Odc1P3 chr5:96121783-96123818 + Intergenic
ENSMUSG00000107092 UCSC
Odc1P5 chr7:41139659-41141479 + Intragenic
ENSMUSG00000083500 UCSC
Odc1P6 chr8:122699136-122700868 - Intragenic
ENSMUSG00000091952 UCSC
Odc1P8 chrX:101767203-101769660 - Intragenic
ENSMUSG00000080845 UCSC
Odc1P9 chrX:119088641-119089439 + Intragenic
ENSMUSG00000082718 UCSC
Odc1P1 chr2:154317577-154318114 - Intragenic
N/A UCSC
Odc1P4 chr7:105512169-105513272 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_013614.2
gCCTCCCGGCCGGAACCGATCGCGGCTGGTTTGAGCTGGTGCGTCTCCATGACGACGTGCTCGGCGTATAAGTAGCGGCGCGTCGCACCGTCGGGCTTTGTCAGTCCCTGCAGCCGCCACCGCCGGCCGCCCTCAGCCAGCAGCTCGGCGCCACCTCCGGTCGGCGTCTGCGGCGGGCTCGACGAGGCGGCTGacggggcggcggcggcgggcggacggacggacggacgggcGCTCCTCGGGGTTTGGCGGCGGCGCCTCCATGGGTCAGGCCAGCCGGGCCACCGTGCTGTGAGTGTTTCCACCACTCCAAGAAGGCAGCATTCAGAGTTCTTGGCTAAGTCGACCTTGTGAGGAGCTGGTGATAATTTGATTCCATCTCCAGGTTCCCTGTAAGCACATCGAGAACCATGAGCAGCTTTACTAAGGACGAGTTTGACTGCCACATCCTTGATGAAGGCTTTACTGCTAAGGACATTCTGGACCAAAAAATCAATGAAGTCTCTTCCTCTGACGATAAGGATGCGTTCTATGTTGCGGACCTCGGAGACATTCTAAAGAAGCATCTGAGGTGGCTAAAAGCTCTTCCCCGCGTCACTCCCTTTTACGCAGTCAAGTGTAACGATAGCAGAGCCATAGTGAGCACCCTAGCTGCCATTGGGACAGGATTTGACTGTGCAAGCAAGACTGAAATACAGTTGGTGCAGGGGCTTGGGGTGCCTGCAGAGAGGGTTATCTATGCAAATCCTTGTAAACAAGTCTCTCAAATCAAGTATGCTGCCAGTAACGGAGTCCAGATGATGACTTTTGACAGTGAAATTGAATTGATGAAAGTCGCCAGAGCACATCCAAAGGCAAAGTTGGTTCTACGGATTGCCACTGATGATTCCAAAGCTGTCTGTCGCCTCAGTGTTAAGTTTGGTGCCACACTCAAAACCAGCAGGCTTCTCTTGGAACGGGCAAAAGAGCTAAATATTGACGTCATTGGTGTGAGCTTCCATGTGGGCAGTGGATGTACTGATCCTGAGACCTTCGTTCAGGCAGTGTCGGATGCCCGCTGTGTGTTTGACATGGCAACAGAAGTTGGTTTCAGCATGCATCTGCTTGATATTGGTGGTGGCTTTCCTGGATCTGAAGATACAAAGCTTAAATTTGAAGAGaTCACCAGTGTAATCAACCCAGCTCTGGACAAGTACTTCCCATCAGACTCTGGAGTGAGAATCATAGCTGAGCCAGGCAGATACTATGTCGCATCAGCTTTCACGCTTGCAGTCAACATCATTGCCAAAAAAACCGTGTGGAAGGAGCAGCCCGGCTCTGACGATGAAGATGAGTCAAATGAACAAACCTTCATGTATTATGTGAATGATGGAGTATATGGATCATTTAACTGCATTCTTTATGATCATGCCCATGTGAAGGCCCTGCTGCAGAAGAGACCCAAGCCAGACGAGAAGTATTACTCATCCAGCATCTGGGGACCAACATGTGATGGCCTTGATCGGATCGTGGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAACATGGGTGCAtacactgttgctgctgcttctacTTTCAATGGGTTCCAGAGGCCAAACATCTACTATGTAATGTCACGGCCAATGTGGCAACTCATGAAGCAGATCCAGAGCCATGGCTTCCCGCCGGAGGTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGACCGTCACCCTGCAGCCTGTGCTTCTGCTAGGATCAATGTGTAGATGCCATTCTTGTAGCTCTTGCCTGCAAGTTTAGCTTGTGTTAAGGCATTTGGGGGGACCATTTAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGGGTCACACTTACTGTGTTCCTATGGAAACTTTGAATATTTGTATTACATggatttttattcacttttcagACATGATACTAACGTGTGCCCCTCAGCTGCTGAGCAAGCGTTTGTAGCTTGTACATTGGCAGAATGGGCCAGAAGCTTATGTTGTGACCCATTGTGAAAATAAAGTATCTTGAAATAACTGGGCATCAGGGAATGTTTGCAAGTATCCTTAAAGAAGGCACCAACATCTGCACAGGCTGCTGTGTCATGGAGAGACCCACTGCCTGTGGATCTGAAGGTTGGGCTAGCCCCGCATAGCACAGAGGAGAGGTGGATGGCACAAGGCTGTGCCCTCTCTGTACAGCATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCCAGAGTCTGTTGGTGAGGAATGTCACCTGCCTAGTGACCGGTTGGCATGGCCACTTCCTAGGGAGGTCATCTGAAGTCCTTGCCTGCAGAAACCCTGACTGTTCCCTCAACCCTTGACTCCCAATTGCATCACCACCTAGTAACAGTTGGGAGTATCATACAACATCGGCAGTCAACTTCCTGTAATAAATTCAACAACAGCAA