Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Prdx1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name peroxiredoxin 1
Also known as MSP23|NkefA|OSF-3|OSF3|PAG|Paga|PrdxI|PrxI|TDX2|TPxA|Tdpx2|prx1
Coordinate chr4:116542796-116557197
Strand +
Gene summary Enables identical protein binding activity. Acts upstream of or within several processes, including natural killer cell mediated cytotoxicity; regulation of intracellular signal transduction; and removal of superoxide radicals. Located in mitochondrion and myelin sheath. Is expressed in several structures, including alimentary system; central nervous system; metanephros; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in methylmalonic aciduria and homocystinuria type cblC. Orthologous to human PRDX1 (peroxiredoxin 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Prdx1

Retroname Coord Strand Genomic Region ENSG
Prdx1P3 chr12:15631685-15631824 + Intergenic
 ENSMUSG00000113339 UCSC
Prdx1P4 chr16:48038894-48039819 + Intergenic
 ENSMUSG00000048164 UCSC
Prdx1P5 chr17:68678121-68678935 - Intragenic
 ENSMUSG00000090224 UCSC
Prdx1P6 chr18:64352832-64353625 - Intergenic
 ENSMUSG00000118022 UCSC
Prdx1P2 chr8:46732576-46733501 + Intergenic
 ENSMUSG00000109692 UCSC
Prdx1P1 chr8:129979409-129980820 + Intergenic
 ENSMUSG00000094530 UCSC

Expression

Transcript Sequences

>NM_011034.4
GGGCGACCTCTTCCTGCGTTCTCACGGCTCTTTCTGTTTGTGAGACCTGTGGCTCGACCCTGCTGATAGCAAGATGTCTTCAGGAAATGCAAAAATTGGGTATCCTGCTCCCAACTTCAAAGCTACAGCTGTTATGCCAGATGGACAATTCAAAGATATCAGCCTAAGTGAATACAAAGGAAAATATGTTGTGTTCTTCTTTTACCCTCTTGACTTTACTTTTGTGTGTCCCACGGAGATCATTGCTTTCAGTGATAGAGCCGATGAATTTAAGAAACTCAACTGCCAAGTGATTGGCGCTTCTGTGGATTCTCACTTCTGTCATCTGGCATGGATTAACACACCCAAGAAACAAGGAGGATTGGGACCCATGAACATTCCCTTAATATCAGATCCCAAGCGCACCATTGCTCAGGATTATGGAGTCTTAAAGGCTGATGAAGGTATCTCTTTCAGGGGCCTTTTTATTATTGATGATAAAGGTATCCTTCGACAGATAACAATAAACGATCTTCCCGTTGGCCGCTCTGTGGATGAGATTATACGACTAGTCCAGGCCTTCCAGTTCACTGACAAACATGGTGAAGTGTGTCCAGCTGGCTGGAAACCTGGCAGTGATACCATCAAGCCTGATGTCAATAAGAGCAAAGAGTATTTCTCTAAGCAGAAGTGAGCACTGGACCATTTTTCTGCCAGGCAGCATTGAGCAGCCAGAAGAAACTCTTGTACTCTACTCGTGCTTAAACACATGATGTGGTGTGATTCCAGATAAGCCTTTCCTACAGGGCTGGGGATGGATAGCCTTTCTTCCACTATTGGTAATGGTCTGAGCTGTGTTTTGGGCAGACCAATCTTCTATCAGTCACAGAAAACAACctgttaattcttttttcttctttttttaagtatCTATTAAACGTGAATTCTGAGAACTTGGTGATTCATTCTTTAAAGGCAACattggaattttaaaaaggaCTTTATTTTCATGAGTAGGTAAAAGTGTTTGAGTgttgtttatcttttttaaaaagaatgtttccCCAGCATGTGTACCATTTACCTGCCTGTTGGATACCCTgggaccatgtgggtgctgggaattgaacctgggtcttctataAGAGCAACGGGGTTCCTAaccattgagctgtctctccagtctcttaacttttgagacaggatctctcactgatctAGAACTTGATGTATATGTGAGGCTAGTAAGCTCTCAGGATCTACTTTTCTAGTGCTGGTTTTATAAGCATGGATTACCATAGTTGgccttttgtttttcgagacagggtttctctgtgtaacagccctggctgtcctggaactctgtagactaggctggcctctgaaagatctacctgcctattTAATCTGCcaggaattaaaagtgtgtgccaccact