Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Pfn1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name profilin 1
Also known as Pfn
Coordinate chr11:70542670-70547625
Strand -
Gene summary Enables small GTPase binding activity. Involved in modification of postsynaptic actin cytoskeleton and synapse maturation. Acts upstream of or within neural tube closure and regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleus. Is active in glutamatergic synapse. Is expressed in several structures, including central nervous system; heart; hemolymphoid system; liver; and lung. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 18. Orthologous to human PFN1 (profilin 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pfn1

Retroname Coord Strand Genomic Region ENSG
Pfn1P1 chr15:10917570-10917906 + Intergenic
ENSMUSG00000115042 UCSC
Pfn1P2 chr18:3446975-3447481 + Intergenic
ENSMUSG00000117370 UCSC

Expression

Transcript Sequences

>NM_011072.4
gggggggggaggagcagGAAGTGGCGGTGCGAGGGCTGCTGCACAGCTAACAGAGCCGCGTTCCGGACGGCAGCGCGTGCCCCGAGCTCTCTGCCTTCCCCCGCCCGCCAGCCCGAGCCCGAGCCCGCGATCCCAGCAACAGCCCGCAGAGCAGCCCCAGCAGCAGCGCCATGGCCGGGTGGAACGCCTACATCGACAGCCTTATGGCGGACGGGACCTGTCAGGACGCGGCCATCGTAGGCTACAAGGACTCGCCCTCCGTCTGGGCCGCCGTCCCCGGGAAGACCTTCGTTAGCATTACGCCAGCTGAGGTTGGTGTCCTGGTAGGCAAAGACCGGTCAAGTTTTTTCGTCAATGGGCTGACACTTGGGGGCCAGAAATGTTCTGTGATCCGGGACTCACTGCTGCAAGACGGGGAATTTACAATGGATCTTCGTACCAAGAGCACCGGAGGAGCCCCCACCTTCAATGTCACTGTCACCATGACTGCCAAGAcGCTAGTCCTGCTGATGGGCAAAGAAGGTGTCCACGGTGGTTTGATCAACAAGAAATGTTATGAAATGGCCTCTCACCTGCGGCGTTCCCAGTACTGACCTCATCTGTCCCTTCCCCCCACCGTTCCCTTTGGCTTTTGCACCCCCTTctttccatacacacacataccattatTTTTTGGGCCATTACCCCATTTCCCTTATTGCTGCCAAAACCAcatgggctgggggctggggctggatgGACAGACACCTCCCCCTACCCATACcccctcctgtgtgtgtttggaaaatttttgtttttgggtttcattttttgttttttggtcttttttttttttttttttttctgaataaaaaaAGATTCTACTAACAA