Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Pgam1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name phosphoglycerate mutase 1
Also known as 2310050F24Rik|Pgam-1
Coordinate chr19:41900310-41907104
Strand +
Gene summary Enables phosphoglycerate mutase activity. Predicted to act upstream of or within glycolytic process. Located in myelin sheath. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Orthologous to several human genes including PGAM1 (phosphoglycerate mutase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pgam1

Retroname Coord Strand Genomic Region ENSG
Pgam1P1 chr1:9510111-9510365 - Intergenic
ENSMUSG00000104428 UCSC
Pgam1P6 chr11:21632393-21634102 - Intragenic
ENSMUSG00000083761 UCSC
Pgam1P7 chr11:79788003-79789684 + Intergenic
ENSMUSG00000083395 UCSC
Pgam1P8 chr15:24130050-24130250 - Intergenic
ENSMUSG00000115341 UCSC
Pgam1P9 chr18:80205937-80207655 + Intergenic
ENSMUSG00000117904 UCSC
Pgam1P4 chr7:27168310-27170044 - Intergenic
ENSMUSG00000082016 UCSC
Pgam1P5 chr9:50126440-50127375 + Intergenic
ENSMUSG00000111589 UCSC
Pgam1P2 chr3:11078573-11080252 - Intergenic
N/A UCSC
Pgam1P3 chr4:85164203-85164353 - Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_023418.2
GCGCATGCGCACACGGGGCGGGCGGCGGTCTGTCGAGCGAGTGGAAAGATTTCGGGGAGAAAGTGCGCGGAAGCGGGGCGGGAGACTGTAAGTGCGCAGGCGCGACCGGGGCGGGGGGCGGGCTGCGAAGAGAATCTCGGCGATCCTCAGTTGCTGCTGCATCCTCTGCCCGTCGCCATGGCTGCCTACAAGCTGGTGCTGATCCGGCATGGCGAGAGCGCCTGGAACCTGGAGAACCGCTTCAGCGGCTGGTACGACGCCGACCTGAGCCCGGCGGGCCACGAGGAGGCGAAGCGCGGCGGGCAGGCGTTGCGAGATGCTGGCTATGAATTTGACATCTGCTTCACCTCTGTGCAGAAGAGAGCAATCCGGACCCTCTGGACAGTCCTGGATGCCATTGACCAGATGTGGTTGCCAGTGGTCAGGACTTGGCGCCTCAATGAGCGACACTATGGCGGTCTGACAGGTCTCAACAAAGCAGAAACTGCTGCTAAGCATGGTGAGGCCCAGGTAAAGATCTGGAGACGATCTTATGATGTCCCACCGCCTCCCATGGAGCCTGATCACCCCTTCTACAGCAACATCAGCAAGgatCGCAGGTACGCAGACCTTACTGAAGACCAGCTCCCCTCCTGTGAGAGCCTGAAGGACACTATTGCCAGAGCACTGCCCTTCTGGAATGAAGAAATTGTCCCCCAGATCAAAGAGGGGAAAAGGGTCTTGATTGCCGCCCACGGCAACAGCCTTCGGGGCATCGTTAAGCATCTGGAGGGTCTCTCAGAAGAGGCCATCATGGAGCTGAACCTGCCCACGGGCATCCCTATCGTCTATGAACTGGACAAGAACTTGAAGCCCATCAAGCCCATGCAGTTCCTGGGAGACGAGGAGACCGTGCGCAAAGCCATGGAAGCTGTGGCTGCTCAGGGCAAGGTGAAGAAGTGAAGGCGAAGAGGCAGACTCCTACCCCGACACCCTCCCTGCCTGTTCCTGCCTCCTGCACCCTCCCCAGCACCTGCCACACTGACTATGTCTTTAGGATTTTAAGTTTAAGTTGTAGCTGCAGATGGGGGCCTGTGGCTCCCGTTTTCATTGTAGTATTTTATCCCCTGCACCCACTCCCTTCATAGAATCTAGTCAGAATAACGCCTCTGGGGGTGCAGGTTCTCGGACCACATCGAGGGACAGCTCCCTGTACCAGGAGAGTTGAGAGATAGTAACTATAGTTTTTCTTAGGTCTTTGTTTACTAAGGGTCTGCTTAGGAAGAATTCAGGGAGGAACTGTGCTGTGGTGTGACCAATGAAAAGCTGCAGTCCAGTTTTGTCCCTGGAACCTGTCCTGCACTCTTCCTGCAGTTAGGTAACTGGGGGCATAGTCATTCCAGTGGAGAGTGGAAGTAACCTCATGGTGATTTTTAACCCTAATTTCTCTCTGACCCTAAAGGAGCTGCTGGCCCTAGAAGGTTGGGATCAATCTTGTCAAGTCTATGTTACACTTACTTTtacaaaaaaaagtatatatacatattatcagCACACAAAAGCAACTCTGAGGTTGCTAGTGACATTTGAAACAGTCCTGTGTGGTCACCAGAAAATAAGCCATTCCTCATATCAGTGGGATAAACTCCTTGTACCTCTTGCTGTGTTTGGATCCCTTGGCCTTGTTTTGTAGAGGTGAAGTACCCCTGGATCATGTCCGAGTTTTTGTCTTTCACTGTCTGAATCATGTTCCAGCTGCTTGACCCTACCGTGTGGGTTCAGAGCTCGTTTGGGCGTAACAACTAAGTCTCTTTCCAGATCAGTATAATAAAGGAGTGATGTGCAATACTTTA