Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Phb
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name prohibitin
Also known as Bap32|Phb1
Coordinate chr11:95557783-95571599
Strand +
Gene summary Enables transcription corepressor activity. Involved in several processes, including CD40 signaling pathway; activation of phospholipase C activity; and positive regulation of macromolecule metabolic process. Acts upstream of or within DNA biosynthetic process and negative regulation of transcription by RNA polymerase II. Located in several cellular components, including cell surface; mitochondrial inner membrane; and nucleus. Is expressed in ectoplacental cone; embryo; and extraembryonic ectoderm. Human ortholog(s) of this gene implicated in breast cancer and sporadic breast cancer. Orthologous to human PHB (prohibitin). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Phb

Retroname Coord Strand Genomic Region ENSG
PhbP2 chr11:81463476-81464357 - Intergenic
ENSMUSG00000080980 UCSC
PhbP3 chr13:33304377-33305365 - Intergenic
ENSMUSG00000082893 UCSC
PhbP1 chr6:85915459-85916332 + Intergenic
ENSMUSG00000107203 UCSC
PhbP12 chrX:79103651-79105375 - Intergenic
ENSMUSG00000080847 UCSC
PhbP13 chrX:86716589-86717471 - Intragenic
Intragenic
ENSMUSG00000084029 UCSC
PhbP5 chrX:104076134-104077108 + Intergenic
ENSMUSG00000082600 UCSC
PhbP6 chrX:106218391-106218989 - Intergenic
ENSMUSG00000082630 UCSC
PhbP7 chrX:129425325-129426292 + Intergenic
ENSMUSG00000081456 UCSC
PhbP8 chrX:132953662-132955224 - Intergenic
ENSMUSG00000080788 UCSC
PhbP9 chrX:140139110-140140089 + Intragenic
ENSMUSG00000083710 UCSC
PhbP10 chrX:144616257-144617254 + Intergenic
ENSMUSG00000080915 UCSC
PhbP11 chrX:145716547-145717371 + Intergenic
ENSMUSG00000084061 UCSC
PhbP4 chr15:6683337-6684344 + Intragenic
Intragenic
ENSMUSG00000067547 UCSC

Expression

Transcript Sequences

>NM_008831.4
gggggtcgggggggggggaggagctgCCTGGCGCACGCGCAGTATCCGGAGCTGGGGaattcatgtggaggtcagagtgaaAGCAGGTGTGAGTGGAAGCAACAGAAGGAGTCATGGCTGCCAAAGTGTTTGAGTCCATTGGAAAGTTCGGCCTGGCGTTGGCAGTTGCAGGAGGCGTGGTGAACTCTGCTTTGTATAATGTGGATGCTGGACACAGAGCTGTCATCTTTGACCGATTCCGTGGCGTACAGGACATTGTGGTCGGGGAAGGGACTCATTTCCTCATCCCTTGGGTACAGAAACCAATTATCTTTGACTGCCGCTCTCGACCACGGAACGTACCAGTCATCACTGGTAGCAAAGACTTGCAGAACGTCAATATCACACTGCGAATCCTCTTCCGGCCGGTGGCCAGCCAGCTTCCTCGTATCTACACCAGCATTGGCGAGGACTATGATGAGCGGGTCCTGCCTTCTATCACCACAGAGATCCTCAAGTCGGTGGTGGCTCGATTCGATGCTGGAGAATTGATTACCCAGCGAGAGCTGGTCTCCAGGCAGGTGAGCGATGACCTCACAGAGCGAGCGGCAACATTTGGGCTTATCCTGGATGACGTGTCCCTGACACATCTGACCTTCGGGAAGGAGTTCACAGAGGCAGTAGAAGCCAAACAGGTGGCTCAGCAGGAAGCGGAGAGAGCCAGATTTGTGGTGGAAAAGGCTGAGCAGCAGAAGAAGGCAGCCATCATCTCTGCTGAGGGTGACTCCAAGGCCGCTGAGCTGATCGCCAACTCGCTGGCCACGGCAGGCGACGGCCTGATCGAGCTGCGGAAGCTGGAGGCCGCCGAGGACATTGCGTACCAGCTCTCCCGCTCTCGGAACATCACCTACCTGCCAGCGGGCCAGTCCGTGCTTCTCCAGCTTCCCCAGTGAGGCCAGCCGGGCCACGGCCTCCATCATGCTGAATGACGCCTTCCTTCTGCCCCACCCCAGAAAATCACTGTGAAATTTCATGATTGGCTTAAAGTGAAGGAAATAAAGGTAAAATCACTTCAGATCTCTAATTATCAAGCGAAGCTTTTATTGTTACACTTCTTACCCTCTTTCATATCCAAAATTGCCAAGTGCCTCTGCAGACTGGCCTTCCACCCTAGGCGCGGGCAGTTGGCAGAAGAAAGGCAGGGCAGTGTGTAGTGGATGGGCAGCCTGCTGGCAGCCTGCATAGGCCTAGGGCCTCCATTCTGCCGTATATTGAAGATTTAAAGACAGTGGCACACACACTTGAACAAAAGCAAGCCCTCAGTGTTTCCAGCCATTTGAACCTGGACAGATGCAGCTGGGGAGGGCCAGAGGAAGTGGTCTATCTCAACTGTAAGGCCCATCCCCTCTTAACCATGACCAGCGGAAGCAGGTGTGTGTGACCAGGGCACGGGGTGAAGAATCTGCCCATCAAGGTGGGTGGGCCTCATGTCGCTGCCCCCACCAGAGTCCTAAAACCTGGATGGACTTGGACGGGACAAGAGGCCTGGACTGAGATGTGAGTCCCATGGAAGACTTCCTCTCCACCCCCCACATCGGTCCTCTCAAATACCCAATGGGATTCCAGCTTGAAGGATTGCATCCTGCAGGGAATGAGCACACCTGCCAAGGACACGTGCGCCTGCCTTCCCGCTCCCTCTCTCTCAGAGATTGCCCTTTCTTCCCGAGGGCTGTGGGCCAGCGCTCCGAAGGAAGCAATCAAGGGGAGAAAACACAGTGTAAGCCGCTGTCAATAAATGACACCCAGACCTTCCAGCTGCA