Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Nup88
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name nucleoporin 88
Also known as Nup84|Prei2
Coordinate chr11:70833884-70860799
Strand -
Gene summary Predicted to be a structural constituent of nuclear pore. Predicted to be involved in mitotic cell cycle and nucleocytoplasmic transport. Predicted to act upstream of or within mRNA transport and protein transport. Predicted to be located in nucleoplasm. Predicted to be part of nuclear pore. Is expressed in central nervous system; early conceptus; gonad; and sensory organ. Human ortholog(s) of this gene implicated in fetal akinesia deformation sequence syndrome 4. Orthologous to human NUP88 (nucleoporin 88). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nup88

Retroname Coord Strand Genomic Region ENSG
Nup88P1 chr10:25710419-25712063 + Intergenic
 ENSMUSG00000112491 UCSC
Nup88P2 chrX:19874265-19874423 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001083331.2
AATCCTGAGCTGTTAGTTCAAGATGGCGGCTGCCGTGGGGCCCTTGGGCGATGGGGAGCTGTGGCAGAGCTGGCTTCCTAACCACGTCGTGTTCTTGCGGCTCCGCGAGGGCGTAAGAAACCAGAGTCCAGCCGAAGCGGAGAAGCCAGCGGCTTCGACTTCACCCTCGTGCCCGTCTCTGCCGCCGCATTTGCCGACGAGAAACCTGGTCTTCGGCCTCGGAGGGGAACTGTTTCTGTGGGACGCAGAAGGCAGCGCCTTCTTGGTGGTTCGCCTTCGAGGCCCCAGCGGTGGTGGCGTGGAGCCTCCTCTCTCCCAGTATCAGAGATTACTCTGCATTAATCCACCCTTGTTTGAAATCCATCAAGTCTTGTTGAGTCCAACCCAACATCATGTAGCACTTATCGGAAGTAAAGGACTTATGGCATTAGAATTACCtcagaggtgggggaaggactctgaaTTTGAAGGTGGAAAAGCAACTGTGAATTGTAGCACCATCCCGATTGCTGAGAGATTTTTCACCAGCTCTACCTCTCTGACTCTGAAGCATGCTGCATGGTATCCAAGTGAGATGCTGGATCCCCACATAGTGCTGTTGACATCAGACAACGTGATAAGaatttATTCTCTCCGTGAGCCCCAGACACCCACTAAGGTGATTGTACTTTcagaagcagaagaggaaagTTTAATACTCAATAAAGGAAGAGCATATACAGCGTCTCTAGGAGAGACTGCAGTGGCGTTTGACTTCGGGCCCCTGGTAACCGTCTCAAAGAATATATttgaacagaaagacagagatgtgGTGGCGTATCCACTGTACATCCTGTATGAGAATGGGGAGACCTTCCTTACCTACGTGAGCCTGTTACACAGCCCAGGGAATATTGGGAAGCTGTTGGGCCCACTGCCTATGCATCCTGCAGCTGAAGATAACTACGGTTACGATGCCTGTGCTATACTCTGTTTGCCCTGTGTTCCAAATATCTTAGTAATTGCGACTGAGTCAGGAATGCTGTACCACTGTGTTGTactagagggagaagaagaagatgacCAAACGTTAGAAAAGTCCTGGGATCCCAGGGCTGACTTCATCCCTTCTCTGTACGTGTTTGAGTGTGTTGAGTTAGAGCTTGCCCTGAAGCTGGCATCTGGAGAGGACGATCCCTTTGCCTCTGACTTTTCCTGCCCAATTAAACTGCACAGAGATCCCAAGTGTCCTTCGAGATACCACTGCAGCCATGAAGCTGGCGTGCACAGTGTGGGGCTGACTTGGATTCACAAACTGCACAAATTTCTTGGATCGGATGAAGAAGATAAGGATAGTTTACAAGAACTCACTGCTGAGCAGAAATGCTTTGTGGAGCACATTCTTTGTACAAAGCCATTGCCGTGCAGGCAGCCAGCTCCAATTCGAGGATTCTGGATCGTCCCAGACATCCTGGGGCCCACAATGATCTGCATCACCAGTACCTATGAATGTCTCATACGGCCTTTATTAAGTACAGTCCACCCAGCATCTCCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGTTGCAGAGTCTCCACTGCGCATTCTGGCTGAAACTCCAGACTCCTTTGAGAAGCATATTAAAAGAATCTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAAAACTGTTCTGCAAGATCATCTGAAAAGGATTTGGCTCCCCCTCCCGAGGAGTGTCTTCAGCTTATCAGCAGAGCCACCCAGGTGTTCCGAGAACAGTACATTCTCAAGCAGGACCTGGCCAAGGAGGAGATTCAGCGGAGGGTCAAATTATTATGTGACCAAAAGAGGAAACAACTCGAAGATCTCAATTACTGTCGAGAGGAAAGGGTTTCTCATCTCTTCAGGAAAAGTCTCCGGGAAATGGCTGAGCGCTTAGCTGACAAATATgaggaagccaaagaaaaacaagaagatatcATGAACAGGATGAAAAAAGTGCTTCACAGTTTTCATGCTCAGCTCCCAGTTCTCTCTGACAGTGAGAGAGACATGAAGAAAGAGTTACAGCTGATACCTGATCAACTGCGACATCTAGGCAACGCCATCAAACAGGTTACTATGAAAAAAGATTATCAACAGCGGAAGATGGAAAAAGTGCTGAGTCCTCAGAAACCCACCATTACTCTCAGTGCCTACCAGCGAAAGTGCATTCAGTCCATCCTGAAAGAAGAGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAATCATGTCACCTTCTGACACCACCTGGAATGAACATAACTTGAAGGCTGTAAAACAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGGTTATTCTTTTGTTAttcctttttgttattatttctgttaaataaatttatttattcaaataaagtttgaataaatttttattcaaaaatttGACTTTGCTTTACAAT
>NM_172394.3
AATCCTGAGCTGTTAGTTCAAGATGGCGGCTGCCGTGGGGCCCTTGGGCGATGGGGAGCTGTGGCAGAGCTGGCTTCCTAACCACGTCGTGTTCTTGCGGCTCCGCGAGGGCGTAAGAAACCAGAGTCCAGCCGAAGCGGAGAAGCCAGCGGCTTCGACTTCACCCTCGTGCCCGTCTCTGCCGCCGCATTTGCCGACGAGAAACCTGGTCTTCGGCCTCGGAGGGGAACTGTTTCTGTGGGACGCAGAAGGCAGCGCCTTCTTGGTGGTTCGCCTTCGAGGCCCCAGCGGTGGTGGCGTGGAGCCTCCTCTCTCCCAGTATCAGAGATTACTCTGCATTAATCCACCCTTGTTTGAAATCCATCAAGTCTTGTTGAGTCCAACCCAACATCATGTAGCACTTATCGGAAGTAAAGGACTTATGGCATTAGAATTACCtcagaggtgggggaaggactctgaaTTTGAAGGTGGAAAAGCAACTGTGAATTGTAGCACCATCCCGATTGCTGAGAGATTTTTCACCAGCTCTACCTCTCTGACTCTGAAGCATGCTGCATGGTATCCAAGTGAGATGCTGGATCCCCACATAGTGCTGTTGACATCAGACAACGTGATAAGaatttATTCTCTCCGTGAGCCCCAGACACCCACTAAGGTGATTGTACTTTcagaagcagaagaggaaagTTTAATACTCAATAAAGGAAGAGCATATACAGCGTCTCTAGGAGAGACTGCAGTGGCGTTTGACTTCGGGCCCCTGGTAACCGTCTCAAAGAATATATttgaacagaaagacagagatgtgGTGGCGTATCCACTGTACATCCTGTATGAGAATGGGGAGACCTTCCTTACCTACGTGAGCCTGTTACACAGCCCAGGGAATATTGGGAAGCTGTTGGGCCCACTGCCTATGCATCCTGCAGCTGAAGATAACTACGGTTACGATGCCTGTGCTATACTCTGTTTGCCCTGTGTTCCAAATATCTTAGTAATTGCGACTGAGTCAGGAATGCTGTACCACTGTGTTGTactagagggagaagaagaagatgacCAAACGTTAGAAAAGTCCTGGGATCCCAGGGCTGACTTCATCCCTTCTCTGTACGTGTTTGAGTGTGTTGAGTTAGAGCTTGCCCTGAAGCTGGCATCTGGAGAGGACGATCCCTTTGCCTCTGACTTTTCCTGCCCAATTAAACTGCACAGAGATCCCAAGTGTCCTTCGAGATACCACTGCAGCCATGAAGCTGGCGTGCACAGTGTGGGGCTGACTTGGATTCACAAACTGCACAAATTTCTTGGATCGGATGAAGAAGATAAGGATAGTTTACAAGAACTCACTGCTGAGCAGAAATGCTTTGTGGAGCACATTCTTTGTACAAAGCCATTGCCGTGCAGGCAGCCAGCTCCAATTCGAGGATTCTGGATCGTCCCAGACATCCTGGGGCCCACAATGATCTGCATCACCAGTACCTATGAATGTCTCATACGGCCTTTATTAAGTACAGTCCACCCAGCATCTCCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGTTGCAGAGTCTCCACTGCGCATTCTGGCTGAAACTCCAGACTCCTTTGAGAAGCATATTAAAAGAATCTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAATCATCTGAAAAGGATTTGGCTCCCCCTCCCGAGGAGTGTCTTCAGCTTATCAGCAGAGCCACCCAGGTGTTCCGAGAACAGTACATTCTCAAGCAGGACCTGGCCAAGGAGGAGATTCAGCGGAGGGTCAAATTATTATGTGACCAAAAGAGGAAACAACTCGAAGATCTCAATTACTGTCGAGAGGAAAGGAAAAGTCTCCGGGAAATGGCTGAGCGCTTAGCTGACAAATATgaggaagccaaagaaaaacaagaagatatcATGAACAGGATGAAAAAAGTGCTTCACAGTTTTCATGCTCAGCTCCCAGTTCTCTCTGACAGTGAGAGAGACATGAAGAAAGAGTTACAGCTGATACCTGATCAACTGCGACATCTAGGCAACGCCATCAAACAGGTTACTATGAAAAAAGATTATCAACAGCGGAAGATGGAAAAAGTGCTGAGTCCTCAGAAACCCACCATTACTCTCAGTGCCTACCAGCGAAAGTGCATTCAGTCCATCCTGAAAGAAGAGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAATCATGTCACCTTCTGACACCACCTGGAATGAACATAACTTGAAGGCTGTAAAACAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGGTTATTCTTTTGTTAttcctttttgttattatttctgttaaataaatttatttattcaaataaagtttgaataaatttttattcaaaaatttGACTTTGCTTTACAAT