Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Lgmn
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name legumain
Also known as AEP|Prsc1
Coordinate chr12:102360341-102405987
Strand -
Gene summary This gene encodes a member of the cysteine peptidase family C13 that plays an important role in the endosome/lysosomal degradation system. The encoded inactive preproprotein undergoes autocatalytic removal of the C-terminal inhibitory propeptide to generate the active endopeptidase that cleaves protein substrates on the C-terminal side of asparagine residues. Mice lacking the encoded protein exhibit defects in the lysosomal processing of proteins resulting in their accumulation in the lysosomes, and develop symptoms resembling hemophagocytic lymphohistiocytosis. [provided by RefSeq, Aug 2016]

Retrocopy(s) from Lgmn

Retroname Coord Strand Genomic Region ENSG
LgmnP1 chr5:114247709-114248050 + Intragenic
ENSMUSG00000106484 UCSC

Expression

Transcript Sequences

>NM_001378875.1
GCCCTGTGGTCTACAGCTGTATGCCCTATGGAATATTCTTTACTCTGGGTCTGCAAACCAAATATTTATTGGGCTGGAGTAAGTAAGTCTTCTGTAGCGGACACGGGGTGCAGAATGACCTGGAGAGTGGCTGTGCTTCTCAGCCTGGTGCTGGGTGCTGGTGCCGTTCCCGTCGGTGTGGACGATCCCGAGGATGGAGGCAAGCACTGGGTGGTGATTGTGGCGGGCTCCAATGGCTGGTATAATTACCGACACCAGGCAGACGCATGCCACGCCTACCAGATCATCCACCGGAACGGGATTCCTGACGAGCAGATCATAGTGATGATGTATGACGACATTGCCAACTCTGAAGAAAACCCTACCCCAGGTGTTGTGATCAACCGACCTAACGGCACAGATGTATACAAGGGAGTCCTGAAGGACTACACCGGAGAGGATGTGACTCCAGAGAATTTCCTCGCCGTGCTGAGAGGTGACGCAGAAGCTGTGAAGGGCAAAGGGTctggaaaagtcttgaagagTGGCCCCCGAGATCATGTCTTCATTTACTTCACCGACCACGGAGCCACCGGGATCCTGGTGTTTCCTAATGATGATCTTCATGTCAAGGACCTGAATAAGACTATTCGCtacatgtatgaacacaaaatGTACCAGAAGATGGTGTTCTACATTGAAGCTTGTGAGTCTGGCTCCATGATGAACCACCTGCCCGACGACATCAACGTTTATGCAACTACTGCGGCCAACCCCAAGGAGTCATCTTATGCCTGCTACTACGACGAGGAGAGGGGCACTTACCTGGGTGACTGGTACAGCGTCAACTGGATGGAAGACTCCGATGTGGAGGACCTGACCAAAGAGacccttcacaagcagtaccacctggtCAAGTCCCACACCAACACCAGCCATGTCATGCAATATGGGAACAAAtcTATCTCTACCATGAAAGTGATGCAGTTTCAGGGAATGAAGCACAGAGCCAGTTCCCCCATCTCCCTGCCTCCGGTCACACACCTTGACCTCACCCCCAGCCCTGACGTGCCCCTGACCATCTTGAAGAGGAAGCTGCTGAGAACCAACGACGTGAAGGAATCCCAGAATCTCATTGGGCAGATCCAGCAATTTCTGGATgccAGGCACGTCATTGAGAAGTCTGTGCACAAGATCGTTTCCCTGCTGGCGGGATTTGGGGAAACTGCTGAGAGACATCTGTCAGAGAGGACCATGCTCACAGCACATGACTGCTACCAGGAGGCTGTAACCCACTTCCGCACACACTGCTTTAACTGGCACTCTGTCACGTACGAGCATGCCTTGCGGTACTTGTATGTGCTGGCCAATCTCTGTGAGGCACCATATCCGATTGACAGGATAGAGATGGCCATGGACAAAGTGTGTCTTAGTCACTACTGAACAGCTCGCTTCCCAATGAGTGAGCACAGTCCACTggaatatgaaccaaccagagaCTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAGAAGCCAGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTTCttaggagtttttttgtttgtttgttttggtttgttttgttgtccaTTAGCTTTCAAGAGCAAATTCCCCGCGGCTTCTCTAGCCAGGGAAGGAATCGTCTGAGAAATTCAAAGCTGAAACCTCTTGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATTTTTAGAATTATATAATTTTtgattgcttttatattttattctgtaaTAATGGATGTCTTAAAACAAATAAGTGAAGTGAGACATTTGTTTCTGGA