Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Psma3
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name proteasome subunit alpha 3
Also known as Lmpc8
Coordinate chr12:71016057-71042651
Strand +
Gene summary Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in proteasomal protein catabolic process and regulation of endopeptidase activity. Part of proteasome core complex. Is expressed in several structures, including alimentary system; central nervous system; cranium; dorsal root ganglion; and lung. Orthologous to human PSMA3 (proteasome 20S subunit alpha 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psma3

Retroname Coord Strand Genomic Region ENSG
Psma3P2 chr14:52606259-52607199 - Intergenic
 ENSMUSG00000105461 UCSC
Psma3P3 chr16:45231889-45232824 + Intragenic
 ENSMUSG00000080715 UCSC
Psma3P1 chr6:31118799-31119578 - Intergenic
 ENSMUSG00000086922 UCSC

Expression

Transcript Sequences

>NM_011184.5
AAGAGGAAAGGCTATTGGTGGAGAGCGCAGCCAATGGGCGAGCCTGTTACTAGCCTGCGCCGTGTGCGGCGTAGGAGCGGCGCTTGAGGCCTGGAAGCGTTCCGCGGCCTGCCGGGTCAGCACCATGAGCTCCATCGGCACTGGGTATGACTTGTCAGCCTCTACGTTCTCTCCTGATGGAAGAGTTTTCCAAGTTGAATATGCCATGAAGGCTGTGGAAAACAGTAGtACAGCTATTGGGATCAGATGTAAAGATGGTGTTGTGTTTGGGGTAGAAAAACTAGTCCTTTCTAAACTTTATGAAGAAGGCTCCAATAAACGTCTTTTTAATGTTGATCGACATGTTGGAATGGCAGTTGCAGGTTTGCTGGCAGATGCTCGTTCATTAGCAGACATAGCGAGAGAAGAAGCATCCAACTTTAGGTCCAACTTCGGCTATAACATTCCTCTAAAAcaTCTTGCAGACAGAGTGGCCATGTATGTACACGCCTATACACTCTACAGCGCTGTTAGACCTTTTGGCTGCAGTTTCATGTTGGGGTCTTACAGTGCGAATGATGGTGCACAGCTCTATATGATCGACCCATCAGGTGTTTCATATGGTTACTGGGGCTGTGCGATTGGCAAAGCCAGGCAGGCTgcaaagacagagatagaaaagCTTCAGATGAAGGAAATGACTTGCCGTGATGTAGTTAAAGAAGTTGCAAAAATAATTTACATAGTACACGATGAAGTTAAGGATAAAGCTTTTGAACTGGAGCTCAGCTGGGTTGGTGAATTAACTAAAGGAAGACATGAAATTGTTCCCAAAGACataagagaggaagcagagaaataTGCCAAGgAATCTTTGAAGGAAGAAGATGAATCAGATGATGACAATATGTAATATTTTCTTCCCCATCCGCTGGTTTACATTTCTGTAACAGTTGCATATGGCTAGCACCATGGACTATATATACCCACTGAccgattttcattaaattttgtcTTATAAACATTGTTGGGTAATTGAAGCTATCTgtgtaatattaaaatatagattGATGTTTGATTAAAAATTCTTAgaactgggcctggagagatggctcagcagttaagagctgctcttccaggggacataggttcaattcccagcacctacaatggcagctcacacctgtctgtaactccagttccaggcttcTGACACCTACAAACTGaggtacatgcaggcaaaacaccaatgaatataaaataaaaataaatgatatctacttacacatataataaatgcaaaaatacaaatatgtatatatacagacacacatgtgtatatacatttaaattcttggTGCTATTCTcgtgtggtagtacatgcctttaatcctagtactcagaggcaggtggacctcttgagttcaaggctagtattcaaaaaaaaaaaaaaaaaaaaaaaaagcagtgccCAGAGTTAAGGCCGAAAGATTGAGCCCACAAGTTAATTTATCCATTTTGTTTTAActagaattaaaataataatttttagatttatttttgtgggtttttttttttttttttttgcatgtttatATTACAATGTCCATGCCTGGTATCCACGAAGGTCAGAAGAGCTTTAATCTAGAACTaaagttatggatggctgtgaatcATGGGTGCtcggaactgaacccaggtcttgtgCAAGAGCAACatgtcctcttaaccactgagccgtctctccagccttcttTAACTAGAATGATCATATTATTCTGTGGTTCTTGTAATAATGTTGTGTTTAATGTAGGGACATTCTGTAACCACTACTGAGAACAGCGAGCTTTTTGTGGAAAATGTGACAGCATTTATTTTTCAGATTGCATAGATATCTTATGACTGGAAATTatcacctgtcttagtcagggtttctattcctgcacaatcatcatgaccaagaagcaagctggggaggaaagggtttattcagcttacactttccattctgctgttcatcaccaaaggaagtcaggactggaactcaaacaggtcagaaagcaggaactgatgcagaggccatggagggatgttctttactggctcgcttcccctggcttgctcagcttactttcttacagaacccaggactactagtccaggggtggcaccgcccacaagggaccctccccacttgatcactaattgagaaaatgctttacagttgggtCTCAATGGAGGCCCTTCCCTAACTAAGCTcctcctctgtgataactccagctgtgtcaagttaataCACAAACCATCCAGTACAGCACTTGAAACAAAAACTTTAAGGTATCAAATTGAGCTTAAATATTCATGTAATAAAATGTTTATAGTACTTCTCTGATAA