Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Psmb1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name proteasome (prosome, macropain) subunit, beta type 1
Also known as Lmpc5
Coordinate chr17:15695983-15718538
Strand -
Gene summary Predicted to enable peptidase activity. Predicted to be involved in proteasomal protein catabolic process. Part of proteasome core complex. Is expressed in central nervous system; dorsal root ganglion; integumental system; rib; and sensory organ. Orthologous to human PSMB1 (proteasome 20S subunit beta 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psmb1

Retroname Coord Strand Genomic Region ENSG
Psmb1P1 chr18:64031340-64032071 - Intragenic
ENSMUSG00000118258 UCSC
Psmb1P2 chrX:93818278-93819301 - Intergenic
ENSMUSG00000081418 UCSC

Expression

Transcript Sequences

>NM_011185.3
AGGAGTTAGGCGCGATGCTTTCCACTGCTGCTTACCGAGACGTGGAACGAGAGCTGGGAATGGGGCCTCACGGCTCCGCCGGCCCTGTGCAGCTGCGGTTTTCGCCTTATGCCTTCAACGGAGGTACTGTATTGGCAATTGCTGGAGAAGATTTTTCCATCGTCGCTTCAGACACTCGATTGAGTGAAGGATTTTCAATTCATACCCGAGATAGCCCCAAATGCTACAAACTGACAGACAAGACAGTAATTGGCTGCAGTGGTTTCCATGGAGATTGTCTCACTTTGACAAAGATTATTGAAGCAAGATTAAAGATGTACAAGCATTCCAATAACAAGGCCATGACAACGGGGGCGATTGCTGCAATGCTGTCTACCATCCTGTACTCACGGCGCTTCTTCCCTTACTATGTTTACAACATCATTGGAGGACTTGATGAAGAAGgaaaGGGAGCTGTGTACAGCTTTGACCCAGTGGGCTCTTACCAGAGAGACTCTTTCAAGGCGGGAGGCTCAGCAAGTGCCATGCTGCAGCCTCTGCTCGACAACCAGgttggcttcaaaaaTATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAGGCTGGTGAAAGATGTCTTCATTTCTGCAGCCGAGAGGGATGTGTATACTGGAGATGCTCTCAGGATCTGCATCGTgaccaaagagggcatcagggaGGAAACTGTTCCCCTGCGGAAAGACTGACATGCGGGTCATATATTGGAGCTGTGGCAcaagtttgttttattaaaaagaatgtaaagTACTCATTTTCTTACACTGTGTCTTCTCTAAGCATGGCAAATTGGGAAGAATTTCTTCCTTAGGGGTCGGAGAGACAACTCTCAGTTTAAAAAgtatggctcttgcagaggacctaagtttgattcctagcacccacctgtaactccagttccaggggctacagtgtcctcttctggcctcgacAGGCACATGCAAATACCCACATACAAATGTatgtaatgaaaaataaaaccactaat