Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Psme1
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Also known as PA28a
Coordinate chr14:55815951-55818984
Strand +
Gene summary Contributes to endopeptidase activator activity. Acts upstream of or within antigen processing and presentation of exogenous antigen. Predicted to be part of proteasome activator complex. Predicted to be active in cytoplasm and nucleoplasm. Is expressed in several structures, including adipose tissue; alimentary system; eye; genitourinary system; and hemolymphoid system gland. Orthologous to human PSME1 (proteasome activator subunit 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psme1

Retroname Coord Strand Genomic Region ENSG
Psme1P1 chr1:91099009-91099885 - Intergenic
ENSMUSG00000100018 UCSC
Psme1P2 chr15:5493654-5494387 + Intergenic
ENSMUSG00000115116 UCSC

Expression

Transcript Sequences

>NM_011189.1
GAGCTGTGCTTTCGCTTTCCCTTCCCGCTGCCCACCCCAGGTTCCTCGTGCGGCGCTCACCACCACCCCCCGGCTCTGGCCATGGCCACACTGAGGGTCCATCCCGAAGCCCAAGCCAAGGTGGATGTGTTCCGTGAAGACCTGTGTAGCAAGACAGAGAACCTGCTTGGGAGCTATTTTCCCAAGAAAATCTCAGAGTTGGATGCGTTCTTAAAGGAGCCAGCTCTCAATGAAGCCAACCTGAGCAATCTGAAGGCTCCATTGGACATCCCAGTACCCGATCCagtcaaagagaaagagaaggaggagcggAAGAAGCAACAGGAGaaggaagagaaggaagagaagaagaaaggggacgAAGACGACAAAGGTCCCCCCTGTGGCCCAGTGAACTGCAATGAGAAGATTGTGGTCCTCCTGCAACGCCTAAAACCTGAGATCAAGGATGTCACTGAGCAACTCAATCTGGTCACTACCTGGTTGCAGCTACAGATACCTCGGATAGAGGATGGGAATAATTTTGGCGTGGCTGTCCAGGAAAAGGTGTTTGAGCTGATGACCAACCTTCACACCAAGCTGGAAGGCTTCCACACGCAGATCTCCAAGTACTTCTCCGAGAGGGGTGACGCCGTGGCCAAAGCAGCCAAGCAGCCCCACGTGGGTGACTATCGGCAGCTGGTGCACGAGCTGGACGAGGCGGAGTACCAGGAGATCCGTCTGATGGTCATGGAGATCCGAAATGCTTAtGCTGTGTTATATGACATCATCCTGAAGAACTTTGAGAAGCTCAAGAAGCCCCGTGGAGAAACCAAGGGAATGATCTATTGAGCCCCCTCTCTCATTCTGTGATGGGTATAGCAGAAACCTTCCTGCttttcaccaggaactctagacTGGACGCAGTCTTCTTCCTACTGGCTGGGGTTTCTCcctcactctgcctcccaaacacaATAAATACATAGTTGCCCACC