Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ptp4a1
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name protein tyrosine phosphatase 4a1
Also known as C130021B01|Prl-1
Coordinate chr1:30979384-30988846
Strand -
Gene summary Predicted to enable protein tyrosine phosphatase activity. Involved in positive regulation of cell migration. Predicted to be located in cytoplasmic side of plasma membrane. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including alimentary system; bladder wall; nervous system; olfactory epithelium; and retina. Orthologous to human PTP4A1 (protein tyrosine phosphatase 4A1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ptp4a1

Retroname Coord Strand Genomic Region ENSG
Ptp4a1P6 chr14:40170525-40171592 + Intergenic
 ENSMUSG00000114280 UCSC
Ptp4a1P7 chr19:40547362-40550199 - Intragenic
 ENSMUSG00000096592 UCSC
Ptp4a1P1 chr2:19997077-19999878 + Intragenic
 ENSMUSG00000060795 UCSC
Ptp4a1P2 chr3:17450055-17451686 + Intergenic
 ENSMUSG00000102646 UCSC
Ptp4a1P3 chr6:131229230-131231657 - Intergenic
 ENSMUSG00000058873 UCSC
Ptp4a1P8 chrX:135790955-135791372 + Intergenic
 ENSMUSG00000082563 UCSC
Ptp4a1P4 chr7:6025375-6026821 - Intergenic
 N/A UCSC
Ptp4a1P5 chr7:89504958-89505157 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_011200.2
CTGGGCGCGCGCATTGGCTCTGGGCTGCGGCCGGCTCGGCGACGCTCCTCGGGCAGCTCACTGCATGGTCGTCTGGTGCCCCCGCCGCCTGCATCCCCGCCGCCGCCCCGCGACGCCCACCGCCGCCTGCCCTGCCGCCGCCGCCTGCGCCGCCTCGGGACCGGCTGTATGATTAGGCCACAATCTTCAATGAGTAGACATATTCCTcagttctgTGGTGTTCTCGGTCACACATTTATGGAGTTTCTGAAGGGCAGTGGAGATTACTGCCAGGCACAGCACGACCTCTATGCAGACAAGTGAACTGTAGAAATTCATTACTACTCCACCAAGAAACCCCCATAAGAGTGGATAACCTGGACACAGGCGTGTTGAATTGAAATCTGCAGAGCATTTGACAAGAGCTCAGACCTGGATGGGGTAAACCTCAGTGCACTTCCTTTGTATTGCCTCAGTATTACTGGATTGAAGACTCACTGCTTCTTGTTAGGAGGTTCATTTCATTGCCCGTTTCTCCCAATTCATACTCAAGCACTGAGAATTTCAAGTGGAGTATATTGAATATTGAAGTAGACTTcaggttgttttttggttttgttttggttttttttttttttttttctgttttggttttaaatCATTTCTGTAttcaattttttaattctttcataaCCCTATTGGgtgtttttttaaactaaattaacATGGCTCGAATGAACCGCCCTGCTCCTGTGGAAGTCACATACAAGAACATGCGATTTCTTATTACACACAATCCAACCAATGCGACCTTAAACAAATTTATAGAGGAACTTAAGAAGTATGGAGTTACCACAATAGTAAGAGTATGTGAAGCAACTTACGACACTACTCTTGTGGAGAAAGAAGGCATTCATGTTCTTGACTGGCCTTTTGATGATGGTGCACCACCATCCAACCAGATTGTCGATGACTGGCTAAGTCTTGTGAAGATTAAGTTTCGTGAAGAACCTGGTTGCTGTATTGCTGTCCATTGTGTCGCAGGCCTTGGCAGAGCTCCGGTGCTTGTTGCCCTAGCATTAATTGAAGGTGGAATGAAATATGAAGATGCAGTACAATTCATAAGACAaaaGCGGCGTGGAGCTTTTAACAGCAAGCAACTTTTGTATCTGGAGAAGTACCGTCCGAAAATGCGGCTCCGCTTCAAGGATTCCAATGGTCATAGAAACAACTGTTGTATTCAATAAAACTGGGGTGCCTGATGCCATTGCCTTGGAAGTGGAACTTCAGATGGGACCTGATTTGTCATGCATATTACCCAATGTGTCGGCTTACTGAATAAGTCTACTGCAGCTCCACAGGAATACTGAAAAACCAGTCTTACCAGGCCACAAGTTTGACAGAATTGCAACCTCTATATTTGGGCTATGATCAACATGTTTGGACACTTAGCAAAAGATTTTTGCTGGTCAGCATTTAAAATGTGCTTATTATTTGTACCAATTGACCTTTCCTAAAATAAGGTATTGAGTTATGTCATTAAATGTACTCCTGTGCCAGAATATTATTAGTCTATAAGGAATTTAGAAGGATTAGGTGCCAAAATACCCAGCACAATACTTGTATATTTTTAGCATCATACAGAACCAAAATTGCAGGAACTGAGAACTCTAGACCATCCATGGTGTATTCCTTCAGTCATTTCAAACACTGCAGGGCTTCTCTCGTTATCTGCCTGCTCACTCTGTTTACATCTCCCACACTTATGCCAGAATACGTCAGGTTTGCTTAGccatcctttattttttttatttttttttttaactaagtctTGCGCTGATTATTTAATATGTctgtctcattttgttttgttttgggaaacCTCTGTTTGAAAATCAACTTTGTTACAGAAGCACATATCTTCAACAATGTCTCCAGACAAAAAGCCTTATAGTTAATTTAATGTTTGCACTCAGAAGTGCAACCTAACAGGGAGGGCCTGAAAAAGAAACGAGAGGAGgctattaaatatttttagtaataTGTTGCCTTTGTCATGTGCAGAACATGTAGAGTATGCTCTTtaatttagtaaatatttttaagacataGAGATACATTGTTGTAGCTAACCAATTCTTAATCAAAATTTCTGAAATTTTTGTGTTTTCCATACCTATCAGAAGTTTTCCAGCTTGTTTGAATTATGGCTTTCCTCTTCCCAATCTCTTGCAAAAAAGACAAAGTGGGATGGATCTGCTAGTGAACTGAGCAGAAATGTTTTATACGCCTTTTGAGCTATGTAACTTAATAATTGGATACTTGatcatttgttttattatgtaATCGATAAAATGGTGATGTGTATTAAAGTTAGTTCAACCATATATTTATACTGTCTGGGAATGTGTGGTTATAGTTCTGTGGGAGAAATAGTTTGTCAGTGTTCACCAGCTTGTAAAAACTTAGTATGAGAGCTtcaacatttaaataaatgatgAACCGCATTCGTCACTGAGGACACTTTTGCCTAAAATTAACTTAATTTGTAGAAAACAATGGATTCAGTTAATATCATTTCAATTTATGGAAAAAATTGTTAGGGTTGCCAAGTGCTTTTTATTAAAAGTTTCTCTTTAAAGGTCTAGATAATTGTGAATCAGTTGAATGTTGGGCACCGAGgggaaacagtttgtaatagATGATCTAGATTTTTCAGTTCAGTTCCATCAGTCACTTGTAGCTCTGCAATTTCCAGAccagttttctcatttttaagttCATTACATGCctgtatatattttgaaattaatttgaACCTGAGTATTTGGCACATGATGGCTTAATAAATTTTAACTTTCAATAAtctgaaatgtttccttttcCTAGTTCATGCTCGTGTTAGATAAATAGGattttttgaaattttgaaaaaagGATATTTCATCTTACACATTTAAGGCTTTACATGCGAATCTAGCACTTAAAACGTGCTGGTCTATAGGCCTTTGCTTCTTTACTAAATGATACACTATTGCCACACAGCCCATAAGTAAACATGCTTTTTGGGAGAAGAAAGGTGCTGTCATGACTACTGAAAGTTTTGACTTTATTAGGTTGTATATATGGTGCTAGAAGTCACTTGCATTATAAACTTACCTGTATGTTACAAACTGAGATTTGCTTTATATTTTCTATCTGTGAGTACACTATCATTCTGCAATAACATCCAAGAAATACCTTGGGTCTAATAAGAATTTAAAGACTTATAAGCTGCATTCTTAAATGCAAGTTGGCTGTTATAAATTTAACTTCCTAGGAGGttggggtatatatatatatatatatatagctcagtgaatgaatgcttgcctagcacacaggaagccctgagtttaattcccagtgtCAGATAAATCATGCATAGTGGTATGCAGAGATTAGAaatccaaggtcatccttagctacataatttagctagcctggtctacatgaaaTGCTGTGTCTAAATGTACTATGCCTGCTTAAGCTGGGGCACTTTTACTAGATAACATAGTGACTACTTGCTCTGGCTTCTGAATTGGGATCACAATGATACTGAGGCAAGTGATGTGATTACTCATTCAGGAGAAGAGGCCGTCTCCACTAAGAGGTACCATAAAATAGATGCCAGCAGTCATTGTGCCCACTGAGATCAAGGTCAGAGCTTTCTACACCCAGACAACTAACTGCCTGCCTAGTGATCACATTGCATGTGCTCAAGTTCCAGAGTGTTGTAAATGATAACCGGCCCCATAGCCTAGCTGTAATCGCAATCCTGGGATCTGTTGTGTTACAGTCATCTGGCAAATATCTGCTCCTGATATTTAGGAATACTGCAAAGGGTTTAGAATTGGGTGCCAGATTCTGTTAATTATCGCACTCCTTACCAGTAACAATTTTTTTGTATTGAAGTTTCAGGAAATGTTAATTTGGTGAGAATGCTTCAAATGGAAGTGACTTGGTTTCTTAATTTATAAGTGAAAGGTTAAAATACACAAATTAGTATCTGCTGTACACATTTATACCCCACATTCTTGAGTCCTTGAATTAATGGTGTGTCTGCATTTTTAACTCATGAATTGGAAATTAAAGACTTGCTTTAAAAGTG