Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rnps1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name RNA binding protein with serine rich domain 1
Also known as -
Coordinate chr17:24633620-24644872
Strand +
Gene summary Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in mRNA metabolic process; positive regulation of apoptotic process; and regulation of mRNA splicing, via spliceosome. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in nucleus. Predicted to be part of ASAP complex. Predicted to be active in cytoplasm and nucleoplasm. Is expressed in central nervous system; sensory organ; thymus; and tooth. Orthologous to human RNPS1 (RNA binding protein with serine rich domain 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rnps1

Retroname Coord Strand Genomic Region ENSG
Rnps1P2 chr6:7981824-7983438 - Intergenic
 ENSMUSG00000096403 UCSC
Rnps1P1 chr6:134815890-134816088 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001080128.1
AAAGTTGCGCCGGCGTCCTGGTCTGAGAAGAGCGGGAGGAGGTGGCGGCCTTGGGAAGATGGCTCCTTCTCCTACCAAACGCAAGGACCGATCTGATGAGAAGTCCAAGGATCGATCTAAAGATAAAGGGGCCACTAAAGAGTCAAGTGAGAAGGATCGTGGCAGAGATAAGACTCGGAAGAGACGCAGTGCTTCAAGCGGAAGCAGCAGTACCAGGTCTAGGTCCAGCTCCACCTCCAGCTCGGGCTCCAGCACCAGCACAGGCTCAAGCAGTGGCTCCAGCTCGTCCTCTGCATCCAGCCGCTCAGGAAGCTCCAGCACGTCCCGGAGCTCCAGTTCTAGCAGCTCCTCCGGCTCCCCAAGCCCTTCTCGGCGCAGGCATGACAACAGGCGGCGCTCCCGCTCCAAatccAAACCACCTAAAAGAGatgaaaaagagaggaaaaggcGGAGCCCTTCACCTAAACCAACCAAAGTGCACATTGGGAGGCTCACCAGGAATGTGACCAAGGATCATATCATGGAAATATTTTCTACTTACGGGAAAATTAAAATGATTGACATGCCTGTTGAGAGGATGCATCCTCACCTCTCCAAAGGCTATGCATATGTGGAGTTTGAGAATCCCGATGAAGCAGAGAAGGCTCTGAAACACATGGATGGAGGACAAATTGATGGCCAAGAGATCACTGCTACTGCTGTGTTGGCACCCTGGCCTCGGCCACCACCTCGGCGATTCAGCCCCCCTAGGAGGATGCTTCCACCACCTCCCATGTGGCGTAGGTCACCCCCACGGATGAGGAGAAGGTCTCGATCCCCAAGACGCAGGTCCCCTGTGCGTAGGAGGTCTCGCTCTCCTGGCCGCCGCCGCCACAGGAGCCGATCCAGCTCCAACTCCTCCCGATAAGCAGGGACATTGATTCGTACCTCTGTAACTTATGTTCCCCAGACTCTGTTTTGTCCTTTTCTCTAGCCAAGTGAGGGTCTGTAGAGAAGGATCCCTTACTGGGTACAGCAGTTGAGATATCTCCTCTACAGAAGGGTTCTGGCTTGTAGAGCTACTGTTGGTTCACGGCTGCTCCCATAGAGGTGCCCTGTAGTTTTCTGGCTAGAAAGTTCATCCCTTCAGTTCTTGATAGGCTGGTAGCAGAGCCAGCTGGAACCTATGGCAGCACACGGATTTCCACAGATGACCCAGAaccagacagcctggtctagccCCCGCTGTGCCACACCTGTGCAAAGGACCACACTGCTCTTCTGTTCGGCCGACCATGCCCTGCTGAGTACGCTTCAACTTAGAGGGCTAAAACCTTTGAAGGATTCCTCCACAAATGGTTACCTTTCTGTCCCCGTGTCTCTGTTACTTTCTAGAATTTGTGAGCCAGTTCTACAGGGTCCTCATGAAACCTACCCCACCCCGTTGTCACCTGCCATTCATGGTGATGTTGCAGGTTAACCTTGGCAGTGTGTACATTGCCCCTTTTTGCTTTTATTGTACAGTCAGTactataaaatttgttttgagttttatAACTTTGTAGCATTTTAGATAAGGTTGTGTTTGTACTTGTGTAGAGTGAAAGGACTGTTGAATAAAACCTAGGATTAGAATGCAAA
>NM_001357626.1
GCGCCTTCCCGCTTCTCACCTCTGACGACAAAGTTGCGCCGGCGTCCTGGTCTGAGAAGAGCGGGAGGAGGTGGCGGCCTTGGGAAGATGCTGGAGACCTAGGCTCGCCACACCGGGCCCGACCTGAGTAGTGAGTGGAGAAAGAGGGTGGGAGGCGAGGTCGATGTCTGTGGCCGGAGCGGACGGTGCAGATTGCGAGCCGGCCTAAAAGGTTGGTTTCCTTTAAAGATCTCTTTCCACGAGTGTCTGTCGGAATCCAGTGTGCAGTTCTCAGTTCTGGGCATTGAGGATCCGTCCTAGGATGGACCGAGCACGGTTACGGAGCTCAGCGGGAGAGGATATGGGAAGGTTATGGTTGATGGTAGAGACGTGGTGGAGGCTTGCTTTCTCTACCTTGTGTTACTTCGTAGGCACTGTGTCTCCGATGTGCTTTTATATGTAGAGAGTGCTTTCAGATTGCCAAGACGCCCTCTGCTCGAGATTTAACCAtttgttttctcctctctctgactGTTGGACGCACACCTTTCCGGAGGATGGGAGAGGTGACCAAGGCTGCTCTTTGGCGTAAATTGCAATCGATTAGGGATCGTTTCTCAGACTCAAGTTAGAAGTGAGAGTTCAGATAAGTGAGGCCGACATTGCTGCCTTGAAGAAGGGGAGAATGGATTTATCAGGAGTGAAAAAGAAGAGCTTGCTAGGAGTCAAAGAGAATAATAAAAAGTCCAGCACTAGGGCTCCTTCTCCTACCAAACGCAAGGACCGATCTGATGAGAAGTCCAAGGATCGATCTAAAGATAAAGGGGCCACTAAAGAGTCAAGTGAGAAGGATCGTGGCAGAGATAAGACTCGGAAGAGACGCAGTGCTTCAAGCGGAAGCAGCAGTACCAGGTCTAGGTCCAGCTCCACCTCCAGCTCGGGCTCCAGCACCAGCACAGGCTCAAGCAGTGGCTCCAGCTCGTCCTCTGCATCCAGCCGCTCAGGAAGCTCCAGCACGTCCCGGAGCTCCAGTTCTAGCAGCTCCTCCGGCTCCCCAAGCCCTTCTCGGCGCAGGCATGACAACAGGCGGCGCTCCCGCTCCAAatccAAACCACCTAAAAGAGatgaaaaagagaggaaaaggcGGAGCCCTTCACCTAAACCAACCAAAGTGCACATTGGGAGGCTCACCAGGAATGTGACCAAGGATCATATCATGGAAATATTTTCTACTTACGGGAAAATTAAAATGATTGACATGCCTGTTGAGAGGATGCATCCTCACCTCTCCAAAGGCTATGCATATGTGGAGTTTGAGAATCCCGATGAAGCAGAGAAGGCTCTGAAACACATGGATGGAGGACAAATTGATGGCCAAGAGATCACTGCTACTGCTGTGTTGGCACCCTGGCCTCGGCCACCACCTCGGCGATTCAGCCCCCCTAGGAGGATGCTTCCACCACCTCCCATGTGGCGTAGGTCACCCCCACGGATGAGGAGAAGGTCTCGATCCCCAAGACGCAGGTCCCCTGTGCGTAGGAGGTCTCGCTCTCCTGGCCGCCGCCGCCACAGGAGCCGATCCAGCTCCAACTCCTCCCGATAAGCAGGGACATTGATTCGTACCTCTGTAACTTATGTTCCCCAGACTCTGTTTTGTCCTTTTCTCTAGCCAAGTGAGGGTCTGTAGAGAAGGATCCCTTACTGGGTACAGCAGTTGAGATATCTCCTCTACAGAAGGGTTCTGGCTTGTAGAGCTACTGTTGGTTCACGGCTGCTCCCATAGAGGTGCCCTGTAGTTTTCTGGCTAGAAAGTTCATCCCTTCAGTTCTTGATAGGCTGGTAGCAGAGCCAGCTGGAACCTATGGCAGCACACGGATTTCCACAGATGACCCAGAaccagacagcctggtctagccCCCGCTGTGCCACACCTGTGCAAAGGACCACACTGCTCTTCTGTTCGGCCGACCATGCCCTGCTGAGTACGCTTCAACTTAGAGGGCTAAAACCTTTGAAGGATTCCTCCACAAATGGTTACCTTTCTGTCCCCGTGTCTCTGTTACTTTCTAGAATTTGTGAGCCAGTTCTACAGGGTCCTCATGAAACCTACCCCACCCCGTTGTCACCTGCCATTCATGGTGATGTTGCAGGTTAACCTTGGCAGTGTGTACATTGCCCCTTTTTGCTTTTATTGTACAGTCAGTactataaaatttgttttgagttttatAACTTTGTAGCATTTTAGATAAGGTTGTGTTTGTACTTGTGTAGAGTGAAAGGACTGTTGAATAAAACCTAGGATTAGAATGCAAA