Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl18
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L18
Also known as L18|Rpl18a
Coordinate chr7:45364891-45370259
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in endoplasmic reticulum; nucleolus; and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in brain. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 18. Orthologous to human RPL18 (ribosomal protein L18). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl18

Retroname Coord Strand Genomic Region ENSG
Rpl18P11 chr11:59372828-59372989 + Intergenic
ENSMUSG00000083234 UCSC
Rpl18P12 chr11:76404892-76405431 + Intragenic
ENSMUSG00000080763 UCSC
Rpl18P13 chr11:84963267-84963866 + Intragenic
ENSMUSG00000082917 UCSC
Rpl18P14 chr11:96139428-96140050 + Intergenic
ENSMUSG00000083337 UCSC
Rpl18P3 chr2:36697800-36698439 - Intergenic
ENSMUSG00000083716 UCSC
Rpl18P2 chr2:167433599-167433790 + Intergenic
ENSMUSG00000081511 UCSC
Rpl18P4 chr3:130640087-130640415 - Intergenic
ENSMUSG00000104984 UCSC
Rpl18P5 chr4:54669896-54670192 - Intergenic
ENSMUSG00000083868 UCSC
Rpl18P6 chr5:6798865-6799483 - Intergenic
ENSMUSG00000106532 UCSC
Rpl18P9 chr6:83818630-83819236 + Intergenic
ENSMUSG00000108107 UCSC
Rpl18P7 chr6:128290298-128290923 + Intragenic
ENSMUSG00000053173 UCSC
Rpl18P10 chr7:126348865-126349125 + Intragenic
ENSMUSG00000108649 UCSC
Rpl18P15 chrX:56798606-56799255 - Intergenic
ENSMUSG00000083821 UCSC
Rpl18P16 chrX:67657436-67657778 + Intergenic
ENSMUSG00000082162 UCSC
Rpl18P1 chr2:132056919-132057252 - Intragenic
N/A UCSC
Rpl18P8 chr6:142259926-142260376 + Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_009077.2
GCTCTTTCCCCGCCCACTCCGGCGCGGTTCCGTCTTTCCGGACCTGGCCGAGCAGGAGGCGCCATCATGGGTGTTGACATTCGCCACAACAAGGACCGAAAGGTTCGGCGCAAGGAGCCCAAGAGCCAGGACATCTACCTGCGGCTGCTTGTCAAGCTGTACAGGTTTCTGGCCAGACGGACCAACTCCACCTTCAATCAGGTTGTGCTGAAGAGGTTGTTCATGAGCCGAACCAACCGGCCACCTCTGTCCCTGTCCCGCATGATCCGAAAGATGAAGCTTCCTGGCCGCGAGAACAAGACTGCCGTGGTTGTGGGGACGGTCACAGATGATGTGCGGATTCTGGAAGTTCCCAAGCTGAAGGTGTGTGCACTGCGGGTGAGCAGCCGGGCCCGGAGTCGCATCCTCAAGGCTGGGGGTAAGATCCTCACCTTTGACCAGCTGGCCCTGGAGTCTCCCAAGGGCCGGGGCACTGTGCTCCTGTCTGGTCCTCGGAAGGGCCGAGAGGTGTACCGACATTTTGGCAAGGCCCCAGGAACCCCACACAGCCATACCAAACCCTATGTCCGTTCCAAGGGCCGGAAGTTTGAGCGCGCCAGAGGCCGAAGGGCCAGCAGAGGCTACAAAAACTAACCCTGGATCTTAACtgttaataaaaaaaacattGGATGATGATGGT