Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl19
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L19
Also known as -
Coordinate chr11:97912829-97921319
Strand +
Gene summary A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to act upstream of or within translation. Part of cytosolic large ribosomal subunit. Is active in synapse. Is expressed in cumulus oophorus; early conceptus; oocyte; and ovary. Orthologous to human RPL19 (ribosomal protein L19). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl19

Retroname Coord Strand Genomic Region ENSG
Rpl19P17 chr10:112527483-112527860 + Intergenic
ENSMUSG00000112678 UCSC
Rpl19P24 chr15:54168062-54168295 - Intergenic
ENSMUSG00000115327 UCSC
Rpl19P32 chr18:25525056-25525464 + Intragenic
ENSMUSG00000089908 UCSC
Rpl19P4 chr2:117857947-117858318 + Intragenic
N/A UCSC
Rpl19P7 chr3:26857127-26857302 - Intragenic
N/A UCSC
Rpl19P11 chr6:49576497-49576744 + Intergenic
N/A UCSC
Rpl19P2 chr1:72732194-72732404 + Intragenic
ENSMUSG00000110487 UCSC
Rpl19P3 chr1:84989806-84990508 + Intergenic
ENSMUSG00000064281 UCSC
Rpl19P1 chr1:157428298-157428992 - Intergenic
ENSMUSG00000103501 UCSC
Rpl19P19 chr10:71154591-71155264 + Intergenic
ENSMUSG00000112582 UCSC
Rpl19P18 chr10:124054933-124055412 + Intergenic
ENSMUSG00000112250 UCSC
Rpl19P22 chr14:8691417-8692024 + Intergenic
ENSMUSG00000091818 UCSC
Rpl19P23 chr14:9850438-9851113 - Intragenic
ENSMUSG00000114453 UCSC
Rpl19P20 chr14:120950465-120951157 + Intergenic
ENSMUSG00000115630 UCSC
Rpl19P26 chr15:8004529-8005229 + Intragenic
ENSMUSG00000116090 UCSC
Rpl19P25 chr15:70833615-70833768 - Intergenic
ENSMUSG00000116168 UCSC
Rpl19P27 chr16:76738475-76739157 + Intergenic
ENSMUSG00000116807 UCSC
Rpl19P30 chr17:8984115-8984783 - Intragenic
ENSMUSG00000083386 UCSC
Rpl19P28 chr17:11764320-11764683 - Intragenic
ENSMUSG00000099618 UCSC
Rpl19P29 chr17:75472170-75472855 + Intragenic
ENSMUSG00000084025 UCSC
Rpl19P31 chr18:24077986-24078691 + Intragenic
ENSMUSG00000117405 UCSC
Rpl19P33 chr19:49697959-49698578 - Intergenic
ENSMUSG00000118059 UCSC
Rpl19P5 chr2:5608524-5609065 + Intragenic
ENSMUSG00000082013 UCSC
Rpl19P6 chr3:127485504-127486195 - Intragenic
ENSMUSG00000089988 UCSC
Rpl19P9 chr5:16075225-16075619 + Intergenic
ENSMUSG00000105916 UCSC
Rpl19P10 chr6:14389623-14389925 - Intergenic
ENSMUSG00000107403 UCSC
Rpl19P12 chr6:71660252-71660948 + Intergenic
ENSMUSG00000108813 UCSC
Rpl19P13 chr7:114771319-114771870 + Intergenic
ENSMUSG00000108401 UCSC
Rpl19P14 chr8:19542925-19543625 + Intergenic
ENSMUSG00000081094 UCSC
Rpl19P15 chr8:35617238-35617607 - Intergenic
ENSMUSG00000109678 UCSC
Rpl19P16 chr9:120145370-120146074 + Intragenic
ENSMUSG00000083772 UCSC
Rpl19P34 chrX:5983251-5983944 + Intergenic
ENSMUSG00000082109 UCSC
Rpl19P8 chr5:110244665-110245357 - Intergenic
N/A UCSC
Rpl19P21 chr14:49349587-49350287 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001159483.1
ACTGCGCATGTGCGCCGCGGAGTCGGACTGAACCATTTTGCCCGACGAAAGGGTATGCTCAGGCTACAGAAGAGGCTTGCCTCTAGTGTCCTCCGCTGCGGGAAAAAGAAGGTCTGGTTGGATCCCAATGAGACCAATGAAATCGCCAATGCCAACTCCCGTCAGCAGATCAGGAAGCTGATCAAGGATGGGCTGATCATCCGCAAGCCTGTGACTGTCCATTCCCGGGCTCGTTGCCGGAAAAACACCCTGGCCCGACGGAAGGGCAGGCATATGGGCATAGGGAAGAGGAAGGGTACTGCCAATGCTCGGATGCCTGAGAAGGTGACCTGGATGAGAAGGATGAGGATCCTGCGCCGGCTTCTCAGGAGATACCGGGAATCCAAGAAGATTGACCGCCATATGTATCACAGCCTGTACCTGAAGGTCAAAGGGAATGTGTTCAAAAACAAGCGCATCCTCATGGAGCACATCCACAAGCTGAAGGCAGACAAGGCCCGCAAGAAGCTCCTGGCTGACCAGGCTGAGGCTCGCAGGTCTAAGACCAAGGAAGCACGAAAGCGCCGGGAGGAGCGCCTCCAGGCCAAGAAGGAAGAGATCATCAAGACTCTGTCCAAGGAGGAGGAGACCAAGAAATAAAGCTTCCCTCGTGTCTGTACATAGCGGCCTGGCTGTGGCCTCATGTGGAtcagtctttaaaataaaacaagcctttGTCTGTTGCCCTCTTGTTTAGCA
>NM_009078.2
GCAGATAATGGGCGGAGCCTGCGGCCCACAAGCTCTTTCCTTTCGCTGCTGCGGCCGCAGCCATGAGTATGCTCAGGCTACAGAAGAGGCTTGCCTCTAGTGTCCTCCGCTGCGGGAAAAAGAAGGTCTGGTTGGATCCCAATGAGACCAATGAAATCGCCAATGCCAACTCCCGTCAGCAGATCAGGAAGCTGATCAAGGATGGGCTGATCATCCGCAAGCCTGTGACTGTCCATTCCCGGGCTCGTTGCCGGAAAAACACCCTGGCCCGACGGAAGGGCAGGCATATGGGCATAGGGAAGAGGAAGGGTACTGCCAATGCTCGGATGCCTGAGAAGGTGACCTGGATGAGAAGGATGAGGATCCTGCGCCGGCTTCTCAGGAGATACCGGGAATCCAAGAAGATTGACCGCCATATGTATCACAGCCTGTACCTGAAGGTCAAAGGGAATGTGTTCAAAAACAAGCGCATCCTCATGGAGCACATCCACAAGCTGAAGGCAGACAAGGCCCGCAAGAAGCTCCTGGCTGACCAGGCTGAGGCTCGCAGGTCTAAGACCAAGGAAGCACGAAAGCGCCGGGAGGAGCGCCTCCAGGCCAAGAAGGAAGAGATCATCAAGACTCTGTCCAAGGAGGAGGAGACCAAGAAATAAAGCTTCCCTCGTGTCTGTACATAGCGGCCTGGCTGTGGCCTCATGTGGAtcagtctttaaaataaaacaagcctttGTCTGTTGCCCTCTTGTTTAGCA