Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl21
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L21
Also known as 8430440E03Rik|L21
Coordinate chr5:146769700-146773842
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytosolic ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in several structures, including forebrain; jaw; mandibular process; sensory organ; and skin. Human ortholog(s) of this gene implicated in hypotrichosis 12. Orthologous to human RPL21 (ribosomal protein L21). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl21

Retroname Coord Strand Genomic Region ENSG
Rpl21P4 chr1:56490533-56490718 + Intergenic
ENSMUSG00000100944 UCSC
Rpl21P5 chr1:69169974-69170492 - Intergenic
ENSMUSG00000084332 UCSC
Rpl21P6 chr1:72043416-72043958 + Intergenic
ENSMUSG00000059483 UCSC
Rpl21P1 chr1:179752485-179753010 - Intergenic
ENSMUSG00000104418 UCSC
Rpl21P2 chr1:180549144-180549687 + Intergenic
ENSMUSG00000104202 UCSC
Rpl21P3 chr1:184349417-184349946 + Intergenic
ENSMUSG00000102606 UCSC
Rpl21P50 chr10:88506350-88506612 - Intergenic
ENSMUSG00000112869 UCSC
Rpl21P48 chr10:113567625-113568082 + Intergenic
ENSMUSG00000112181 UCSC
Rpl21P49 chr10:121179050-121179598 + Intragenic
ENSMUSG00000111940 UCSC
Rpl21P53 chr11:6508987-6509530 - Intragenic
ENSMUSG00000084231 UCSC
Rpl21P52 chr11:60709603-60710143 - Intergenic
ENSMUSG00000083016 UCSC
Rpl21P54 chr11:85841286-85841817 + Intergenic
ENSMUSG00000081632 UCSC
Rpl21P51 chr11:115615118-115615661 - Intergenic
ENSMUSG00000083394 UCSC
Rpl21P55 chr12:54474821-54475378 + Intergenic
ENSMUSG00000112204 UCSC
Rpl21P56 chr12:59140812-59141362 - Intergenic
ENSMUSG00000060566 UCSC
Rpl21P57 chr12:86892517-86892977 - Intergenic
ENSMUSG00000113555 UCSC
Rpl21P58 chr12:87467237-87467787 + Intergenic
ENSMUSG00000114103 UCSC
Rpl21P60 chr13:12393005-12393555 + Intergenic
ENSMUSG00000094185 UCSC
Rpl21P61 chr13:22137232-22137709 - Intragenic
ENSMUSG00000078917 UCSC
Rpl21P62 chr13:34502853-34503197 + Intragenic
ENSMUSG00000113430 UCSC
Rpl21P63 chr13:78421564-78422111 - Intergenic
ENSMUSG00000114592 UCSC
Rpl21P64 chr13:88626663-88627200 + Intergenic
ENSMUSG00000057685 UCSC
Rpl21P59 chr13:103533577-103534132 + Intergenic
ENSMUSG00000095940 UCSC
Rpl21P65 chr14:11241746-11242262 - Intergenic
ENSMUSG00000072714 UCSC
Rpl21P66 chr14:51006665-51007206 + Intragenic
ENSMUSG00000078125 UCSC
Rpl21P67 chr14:67035311-67035850 - Intergenic
ENSMUSG00000114829 UCSC
Rpl21P68 chr15:68181635-68182180 + Intergenic
ENSMUSG00000068397 UCSC
Rpl21P69 chr16:83168105-83168662 - Intergenic
ENSMUSG00000071475 UCSC
Rpl21P70 chr17:14082545-14083097 - Intragenic
ENSMUSG00000089883 UCSC
Rpl21P72 chr17:45776674-45777229 + Intragenic
ENSMUSG00000061242 UCSC
Rpl21P73 chr17:53905183-53905718 - Intragenic
ENSMUSG00000096517 UCSC
Rpl21P74 chr17:56222369-56222906 - Intergenic
ENSMUSG00000059912 UCSC
Rpl21P75 chr17:83595944-83596489 + Intergenic
ENSMUSG00000094256 UCSC
Rpl21P76 chr18:30741553-30742108 - Intergenic
ENSMUSG00000117526 UCSC
Rpl21P77 chr18:42574041-42574604 + Intergenic
ENSMUSG00000056849 UCSC
Rpl21P78 chr18:82541630-82542177 - Intragenic
Intragenic
ENSMUSG00000061684 UCSC
Rpl21P80 chr19:7704513-7705070 - Intergenic
ENSMUSG00000117937 UCSC
Rpl21P79 chr19:45866049-45866603 - Intragenic
ENSMUSG00000117972 UCSC
Rpl21P10 chr2:24875961-24876511 + Intragenic
ENSMUSG00000084383 UCSC
Rpl21P11 chr2:67537596-67538152 - Intragenic
ENSMUSG00000083910 UCSC
Rpl21P12 chr2:71150089-71150637 + Intragenic
ENSMUSG00000082190 UCSC
Rpl21P13 chr2:75022584-75023136 + Intergenic
ENSMUSG00000075276 UCSC
Rpl21P7 chr2:136586042-136586574 - Intragenic
ENSMUSG00000082849 UCSC
Rpl21P8 chr2:147122498-147123043 - Intergenic
ENSMUSG00000081971 UCSC
Rpl21P9 chr2:173762111-173762653 - Intergenic
ENSMUSG00000082543 UCSC
Rpl21P16 chr3:38013742-38014261 - Intergenic
ENSMUSG00000087457 UCSC
Rpl21P17 chr3:74230803-74231318 - Intergenic
ENSMUSG00000104227 UCSC
Rpl21P18 chr3:88336212-88336738 + Intergenic
ENSMUSG00000106568 UCSC
Rpl21P19 chr3:96573783-96574337 - Intergenic
ENSMUSG00000105144 UCSC
Rpl21P14 chr3:138534406-138534950 - Intragenic
ENSMUSG00000086123 UCSC
Rpl21P15 chr3:144132910-144133467 - Intergenic
ENSMUSG00000106416 UCSC
Rpl21P22 chr4:17256076-17256361 - Intergenic
ENSMUSG00000083572 UCSC
Rpl21P23 chr4:45549990-45550531 + Intergenic
ENSMUSG00000081559 UCSC
Rpl21P20 chr4:126950019-126950550 + Intragenic
ENSMUSG00000084149 UCSC
Rpl21P21 chr4:135130479-135130843 - Intergenic
ENSMUSG00000081136 UCSC
Rpl21P28 chr5:5617452-5617599 + Intergenic
ENSMUSG00000104716 UCSC
Rpl21P27 chr5:51209683-51210229 + Intergenic
ENSMUSG00000106267 UCSC
Rpl21P29 chr5:68145836-68146391 - Intergenic
ENSMUSG00000107257 UCSC
Rpl21P30 chr5:88887071-88887632 - Intergenic
ENSMUSG00000095524 UCSC
Rpl21P24 chr5:113208355-113208894 + Intergenic
ENSMUSG00000105406 UCSC
Rpl21P25 chr5:130236902-130237429 - Intragenic
ENSMUSG00000094092 UCSC
Rpl21P26 chr5:146136773-146137274 - Intergenic
ENSMUSG00000105542 UCSC
Rpl21P33 chr6:22245405-22245966 - Intragenic
ENSMUSG00000106736 UCSC
Rpl21P34 chr6:90821931-90822469 - Intragenic
ENSMUSG00000058700 UCSC
Rpl21P31 chr6:112969057-112969580 + Intergenic
ENSMUSG00000108215 UCSC
Rpl21P32 chr6:128507834-128508388 - Intergenic
ENSMUSG00000057370 UCSC
Rpl21P37 chr7:33736591-33736896 - Intragenic
ENSMUSG00000083434 UCSC
Rpl21P38 chr7:67535939-67536245 - Intergenic
ENSMUSG00000109152 UCSC
Rpl21P35 chr7:125898565-125899115 - Intergenic
ENSMUSG00000066180 UCSC
Rpl21P36 chr7:139299276-139299831 + Intergenic
ENSMUSG00000056777 UCSC
Rpl21P41 chr8:4911129-4911680 + Intergenic
ENSMUSG00000062152 UCSC
Rpl21P40 chr8:21581351-21581898 + Intergenic
ENSMUSG00000085898 UCSC
Rpl21P42 chr8:79595981-79596538 - Intergenic
ENSMUSG00000069986 UCSC
Rpl21P43 chr9:17696567-17697124 - Intergenic
ENSMUSG00000111161 UCSC
Rpl21P44 chr9:20466597-20467140 + Intragenic
ENSMUSG00000111661 UCSC
Rpl21P45 chr9:31955647-31956193 - Intragenic
ENSMUSG00000110845 UCSC
Rpl21P47 chr9:88272857-88273405 + Intragenic
ENSMUSG00000066443 UCSC
Rpl21P82 chrX:46989191-46989737 + Intragenic
ENSMUSG00000068014 UCSC
Rpl21P83 chrX:57754552-57754775 - Intergenic
ENSMUSG00000083843 UCSC
Rpl21P84 chrX:67050673-67050893 - Intergenic
ENSMUSG00000083709 UCSC
Rpl21P85 chrX:88002787-88003282 + Intergenic
ENSMUSG00000081167 UCSC
Rpl21P81 chrX:149998129-149998684 - Intragenic
ENSMUSG00000083596 UCSC
Rpl21P71 chr17:29527071-29527627 + Intergenic
ENSMUSG00000094326 UCSC
Rpl21P39 chr7:73023255-73023778 + Intergenic
N/A UCSC
Rpl21P46 chr9:57745127-57745653 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_019647.6
GTCAGCACGCTACGGAAGTCGCGTCCGGCTCCACGCCCGCGAGGGCCCCATTCCGGGATGTCTAGCAGGATGCCTGAGTGAGTTTCTGTTGGCCTGCTGCCTTTAATCTGCGCCGGGGAGCGTGTCCTCACGGCGTCTCCAGGTTATCGGGACGATGAGGTTCTCTCGACCAGCCTCGCGGGCCCGGCGTTTCTCTTCAGGCAGCTTCGCGGGCAGCCCTCGGGCCTTGTAAGAGCGCGCAGCCCCGCCCTCCTCCTTTCGGCCGCCGCAGCCATCTTCCAGTAACTCGCCAAAATGacgaacacaaagggaaagaggagaggcacccggtacatgttctctaggccttttaggaaacatggcgttgttcctttggccacatacatgcgaatctacaagaagggtgatattgtagacatcaagggaatgggcactgttcaaaaaggaatgccccataagtgctaccacggcaaaaccggaagagtctacaatgtcacccagcatGCCGTGGGCATCATTGTCAACAAGCAGGTTAAGGGCAAAATTCTGGCCAAGAGGATCAATGTGCGGATTGAGCACATCAAGCACtcaaagagcagagacagcttcctgaagcgggtgaaggagaatgaccagaagaaaaaggaagccaaagagaagggcacctgggtgCAGCTGAAGCGCCAGcctgcgccacccagagaagcacactttgtgaggactaatggaaaagagcctgagctgttggagcccattccatacgaattcatggcctaatgtacacaaagaaataaaataccagcaCCAGGACTGTGAAGTGTTTTCCTTAGACTGTAGTGTGGGGTTTGCTCATTGGCTTTCTTGTTCAGATTTTACTAATTGTTCTAAATGATACAGCTTAGTGTGCAGAAAATATCCTCTTGATTGGAAAATAGCCAAATATTTACAAAACAGGTATACTAGTTTGAAGAGGCTCtatatggggggagggggtgctggaAAACATTAGTGGGTGACCAGTAATGGTGGTACAGCTCTAACTCCTAGCACCAGGAGTCCGAGGCAGGGGGATCTTCAGGCTGCATGATGTGCATAGTAGCATGCTGGTATTAGGGAGTGGGTATCTGTGGTTCCCACTTTGAAAATAACCAAAATTCTCCAAAGTGGGCAGACCTAAGCCAGGAGAGGGCTGGCCACAGACATTTGGTACTGCTTGCTGAGAAAGCACTGATtgttttcctaacctaaagattATATATGGCCCACCATACCATCTTTGAAACAATGTGTACTGGCCTTTGGTTCACCTTTCTTGTCTTTGAAGTTGTACTTGGTGGGTGCATTTAACCTTGCCACAGAGTGGGGAGGATAGAGTCTAATGGACCTTAAGTGGTCTCTGGTGGCCATGTCGGCAGTGCTTAGGTTGTAGCCCAGGGTTGGAGTCGGCAGTGACAAGCAAATAACTATATTCTTGCTTGCTGTGGCAGCTATACAGAAATTTACGGTATAGGTAAGAGGGTTCTCTAGAAGTACTACCTGTCTTAGTGAAAGAGATTGCTTGgttaacatcctgttatgtagTGGGGCTACTTTTAAACTGTGTGAAGTCCCCATTAGCCACCTCCATAGGCAATGGAGCTAACATTCTTGCTACAGTGGCCGCAGCTCATTAACACCTAATGATGTGTTTAACATGTGTCCACATGGTGTGAATGTGGGTACGCATGTGCCCAGTATTCAGTTCACAGAATTGTCATCATCTTCCATCATGTCTTCAGTGAGGGACTCTGCAGATGCCCACCCCAGTCCTTGGTtgtggtgattctgttagcattAAATGCACTGGAGAGCTTCAA