Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl26
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L26
Also known as SIG-20
Coordinate chr11:68792392-68795360
Strand +
Gene summary Predicted to enable mRNA 5'-UTR binding activity. Predicted to be a structural constituent of ribosome. Involved in DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; cellular response to ionizing radiation; and positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator. Predicted to be located in cytosolic ribosome; nucleolus; and nucleoplasm. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 11. Orthologous to human RPL26 (ribosomal protein L26). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl26

Retroname Coord Strand Genomic Region ENSG
Rpl26P1 chr1:27375392-27375889 - Intergenic
ENSMUSG00000100310 UCSC
Rpl26P16 chr10:43515224-43515553 + Intergenic
ENSMUSG00000111300 UCSC
Rpl26P18 chr11:70019755-70020187 - Intergenic
ENSMUSG00000081515 UCSC
Rpl26P19 chr11:93585985-93586421 + Intergenic
ENSMUSG00000080872 UCSC
Rpl26P21 chr12:57679323-57679832 - Intragenic
ENSMUSG00000066489 UCSC
Rpl26P20 chr12:113788839-113789321 + Intergenic
ENSMUSG00000103944 UCSC
Rpl26P22 chr14:67825811-67826282 - Intergenic
ENSMUSG00000114514 UCSC
Rpl26P23 chr16:17529490-17530010 + Intragenic
ENSMUSG00000059150 UCSC
Rpl26P26 chr17:7058178-7058950 + Intergenic
ENSMUSG00000116893 UCSC
Rpl26P25 chr17:51791274-51791786 - Intergenic
ENSMUSG00000117041 UCSC
Rpl26P27 chr18:86797857-86798303 + Intergenic
ENSMUSG00000118328 UCSC
Rpl26P28 chr19:28980763-28981271 - Intragenic
Intragenic
Intragenic
ENSMUSG00000063754 UCSC
Rpl26P29 chr19:59325996-59326385 + Intragenic
ENSMUSG00000118276 UCSC
Rpl26P30 chr19:60803900-60804235 - Intragenic
ENSMUSG00000083036 UCSC
Rpl26P3 chr2:14631657-14632175 - Intragenic
ENSMUSG00000070271 UCSC
Rpl26P2 chr2:142412387-142412907 + Intergenic
ENSMUSG00000081125 UCSC
Rpl26P4 chr3:7257793-7258273 - Intergenic
ENSMUSG00000104274 UCSC
Rpl26P7 chr4:13482713-13483234 - Intergenic
ENSMUSG00000083328 UCSC
Rpl26P5 chr4:119366805-119367299 - Intergenic
ENSMUSG00000082814 UCSC
Rpl26P6 chr4:120758512-120758754 + Intergenic
ENSMUSG00000082200 UCSC
Rpl26P10 chr5:3286389-3286909 + Intergenic
ENSMUSG00000062353 UCSC
Rpl26P8 chr5:100661008-100661491 - Intergenic
ENSMUSG00000105181 UCSC
Rpl26P9 chr5:139687366-139687764 + Intergenic
ENSMUSG00000104637 UCSC
Rpl26P12 chr8:11764757-11765280 - Intergenic
ENSMUSG00000110313 UCSC
Rpl26P13 chr9:43128377-43128890 + Intragenic
Intragenic
ENSMUSG00000111864 UCSC
Rpl26P14 chr9:79951158-79951509 - Intergenic
ENSMUSG00000111574 UCSC
Rpl26P15 chr9:82084671-82085097 + Intragenic
Intragenic
Intragenic
ENSMUSG00000081273 UCSC
Rpl26P11 chr7:116197249-116197788 - Intragenic
N/A UCSC
Rpl26P17 chr11:43656544-43656708 - Intergenic
N/A UCSC
Rpl26P24 chr16:28606944-28607394 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_009080.2
AGAACCGGAAGTCGCGTGTAGTTCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGccaaAATGAAGTTCAATCCCTTCGTGACTTCTGACCGAAGCAAGAACCGCAAACGGCATTTCAATGCGCCCTCTCACATTCGGAGGAAGATCATGTCTTCCCCTCTTTCcaaagagctgagacagaagtatAACGTTCGGTCTATGCCCATTCGGAAGGATGACGAAGTTCAGGTTGTTCGCGGACACTACAAAGGCCAGCAGATTGGCAAGGTGGTCCAAGTGTACAGGAAGAAGTACGTCATCTACATCGAACGAGTCCAGCGAGAGAAGGCTAATGGCACAACCGTCCATGTGGGCATCCACCCCAGCAAGGTCGTTATCACCAGGCTAAAGCTGGACAAGGACcgcaagaagatcctggagaggaaAGCCAAGTCCCGACAAGTAGGAAAGGAGAAGGGCAAATACAAGGAAGAAACGATCGAGAAGATGCAGGAGTAGAGACATCTCGTGCACGGCTTTCATTAAAGACTGCTTAAGTA