Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl27
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L27
Also known as -
Coordinate chr11:101333071-101336422
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in rRNA processing. Predicted to be located in cytosolic ribosome; nucleolus; and nucleoplasm. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in lower jaw molar; lower jaw tooth; tooth; and upper jaw incisor. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 16. Orthologous to human RPL27 (ribosomal protein L27). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl27

Retroname Coord Strand Genomic Region ENSG
Rpl27P1 chr1:171132643-171133117 - Intergenic
ENSMUSG00000079137 UCSC
Rpl27P2 chr1:193157597-193158024 + Intergenic
ENSMUSG00000102648 UCSC
Rpl27P20 chr10:9231888-9232291 + Intragenic
ENSMUSG00000112048 UCSC
Rpl27P18 chr10:13080959-13081420 + Intergenic
ENSMUSG00000112042 UCSC
Rpl27P19 chr10:75781085-75781559 - Intragenic
ENSMUSG00000082234 UCSC
Rpl27P24 chr11:93927995-93928504 - Intragenic
ENSMUSG00000081604 UCSC
Rpl27P21 chr11:101830369-101830766 + Intergenic
ENSMUSG00000082171 UCSC
Rpl27P22 chr11:114823661-114824111 + Intragenic
ENSMUSG00000083677 UCSC
Rpl27P23 chr11:116441351-116441519 + Intragenic
ENSMUSG00000083314 UCSC
Rpl27P25 chr14:98511350-98511533 - Intergenic
ENSMUSG00000115218 UCSC
Rpl27P26 chr15:68483249-68483550 - Intergenic
ENSMUSG00000116367 UCSC
Rpl27P27 chr15:85395018-85395456 + Intergenic
ENSMUSG00000063548 UCSC
Rpl27P28 chr16:95555466-95555952 + Intergenic
ENSMUSG00000117167 UCSC
Rpl27P29 chr17:3174833-3175055 - Intragenic
ENSMUSG00000116596 UCSC
Rpl27P31 chr18:6332590-6333084 + Intergenic
ENSMUSG00000073640 UCSC
Rpl27P30 chr18:38850554-38851219 - Intragenic
ENSMUSG00000083766 UCSC
Rpl27P32 chr19:37401844-37402331 - Intragenic
ENSMUSG00000118211 UCSC
Rpl27P4 chr2:46296329-46296617 - Intergenic
ENSMUSG00000082679 UCSC
Rpl27P5 chr3:103602127-103602399 + Intergenic
ENSMUSG00000081910 UCSC
Rpl27P7 chr4:55392261-55392738 - Intergenic
ENSMUSG00000084144 UCSC
Rpl27P6 chr4:131821182-131821644 + Intergenic
ENSMUSG00000083368 UCSC
Rpl27P9 chr5:8105086-8105585 + Intragenic
ENSMUSG00000082867 UCSC
Rpl27P8 chr5:34254009-34254378 + Intragenic
ENSMUSG00000106771 UCSC
Rpl27P11 chr6:83769570-83769995 - Intergenic
ENSMUSG00000108525 UCSC
Rpl27P10 chr6:148905378-148905860 + Intragenic
ENSMUSG00000082633 UCSC
Rpl27P15 chr7:98504001-98504229 - Intergenic
ENSMUSG00000091496 UCSC
Rpl27P12 chr7:100803812-100804351 - Intragenic
ENSMUSG00000083121 UCSC
Rpl27P13 chr7:121730284-121730767 + Intragenic
ENSMUSG00000089631 UCSC
Rpl27P16 chr8:125745589-125745910 - Intragenic
Intragenic
ENSMUSG00000110683 UCSC
Rpl27P17 chr9:103765172-103765651 + Intergenic
ENSMUSG00000100266 UCSC
Rpl27P34 chrX:40774838-40775294 - Intergenic
ENSMUSG00000082966 UCSC
Rpl27P35 chrX:85836131-85836421 + Intragenic
Intragenic
ENSMUSG00000083779 UCSC
Rpl27P33 chrX:164807133-164807366 - Intergenic
ENSMUSG00000081012 UCSC
Rpl27P3 chr2:125439707-125439944 + Intragenic
N/A UCSC
Rpl27P14 chr7:5388891-5389108 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_011289.3
CTGCTGCTCGTGCTGCTAATAAAGCTTGGTTCAAAAACGCAGTGCCCGACCCTCCCTGACGAGCTCCTTCCGCCAACAACTTTGACCACCAACCGTGGGGCATGGCTGGGCCTGGGAGGCGGGACAGGAAGTGAAGCCACCTCTCCGTAAGGTGAAAGGTTAGCGGAAgtgccctcctttcctttctgctgGGTGCCGGCTGCCTGCTGTCGAGATGGGCAAGTTCATGAAACCCGGGAAAGTGGTGCTGGTCCTGGCCGGACGCTACTCCGGACGCAAAGCCGTCATCGTGAAGAACATTGACGATGGCACCTCGGACCGCCCTTACAGCCATGCCCTGGTGGCTGGAATTGACCGCTATCCCCGGAAAGTGACAGCTGCCATGGGCAAGAAGAAGATCGCCAAGCGATCCAAGATCAAGTCCTTTGTGAAAGTTTATAACTACAACCACCTCATGCCCACAAGGTACTCTGTGGATATCCCCTTGGACAAGACTGTTGTCAACAAGGATGTGTTCAGGGACCCAGCTTTGAAGCGCAAGGCCAGGCGGGAGGCCAAGGTCAAGTTTGAGGAGCGatACAAGACAGGGAAGAACAAATGGTTTTTCCAGAAGCTTCGCTTTtaggtatatttttgttttggtcattaaaaattaaaaaaaaaaaaatacaagtgtcTGCCTATTGCATTTGTGTGGGAAGAGACTGGGGAAATAAAACAGGTGTGCTGTTGTG