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Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl28
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L28
Also known as D7Wsu21e
Coordinate chr7:4795964-4797546
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in several cellular components, including cell body; cytoplasmic ribonucleoprotein granule; and cytosolic ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in several structures, including extraembryonic component; gonad; intestine; liver; and lung. Orthologous to human RPL28 (ribosomal protein L28). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl28

Retroname Coord Strand Genomic Region ENSG
Rpl28P1 chr1:127966263-127966759 + Intragenic
ENSMUSG00000058603 UCSC
Rpl28P10 chr11:95067596-95068118 + Intergenic
ENSMUSG00000083548 UCSC
Rpl28P11 chr16:29911258-29911555 - Intergenic
ENSMUSG00000116997 UCSC
Rpl28P12 chr17:93698914-93699127 - Intergenic
ENSMUSG00000117368 UCSC
Rpl28P2 chr2:45537160-45537653 + Intergenic
ENSMUSG00000083510 UCSC
Rpl28P3 chr3:83593985-83594618 + Intergenic
ENSMUSG00000102137 UCSC
Rpl28P4 chr4:125963619-125964109 - Intragenic
ENSMUSG00000079942 UCSC
Rpl28P5 chr4:145303418-145303904 - Intergenic
ENSMUSG00000083454 UCSC
Rpl28P6 chr5:133503919-133504415 + Intergenic
ENSMUSG00000058905 UCSC
Rpl28P7 chr5:143053398-143053626 + Intragenic
ENSMUSG00000105714 UCSC
Rpl28P8 chr6:117190650-117191066 - Intragenic
ENSMUSG00000090549 UCSC
Rpl28P9 chr8:79331048-79331374 + Intragenic
ENSMUSG00000110244 UCSC

Expression

Transcript Sequences

>NM_009081.2
CTCTTTCCGTCTCCGGCCGCCATAGGGAGAGGAGCCGCCGCCATGTCCGCGCATCTGCAGTGGATGGTCGTCCGGAACTGCTCCAGTTTCTTGATCAAGAGGAATAAGCAGACGTACAGCACGGAGCCAAATAATCTGAAAGCCCGAAACTCCTTCCGCTACAACGGGCTAATTCACCGCAAGACCGTCGGAGTGGAGCCGGCCGCCGATGGCAAAGGGGTCGTGGTAGTTATGAAACGCAGATCCGGTCAGCGAAAACCTGCCACTTCTTATGTGAGGACCACCATCAACAAGAATGCTCGGGCTACCCTCAGCAGCATCAGACACATGATCCGAAAGAACAAGTACCGCCCTGATCTGCGTATGGCGGCCATCCGCAGGGCCAGTGCCATCCTTCGAAGCCAGAAGCCTGTGGTGGTGAAGAGGAAACGGACCCGCCCCACCAAGAGCTCCTGAGCCCCACACGCCCGAAGCAATAAAGAGTCCACTGACTTCC