Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl36a
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L36A
Also known as L44L|Rpl44
Coordinate chrX:133486403-133488811
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in endoplasmic reticulum; plasma membrane; and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL36A (ribosomal protein L36a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl36a

Retroname Coord Strand Genomic Region ENSG
Rpl36aP11 chr10:81552822-81553420 - Intragenic
ENSMUSG00000112339 UCSC
Rpl36aP12 chr11:6396186-6396635 + Intergenic
ENSMUSG00000079988 UCSC
Rpl36aP16 chr12:80660041-80660417 + Intergenic
ENSMUSG00000112606 UCSC
Rpl36aP18 chr13:76167827-76168200 - Intergenic
ENSMUSG00000114366 UCSC
Rpl36aP20 chr15:65072142-65072344 - Intergenic
ENSMUSG00000115066 UCSC
Rpl36aP21 chr18:59907186-59907574 - Intergenic
ENSMUSG00000118327 UCSC
Rpl36aP23 chr19:41891293-41891689 + Intergenic
ENSMUSG00000117675 UCSC
Rpl36aP1 chr2:4946973-4947568 + Intergenic
ENSMUSG00000086670 UCSC
Rpl36aP2 chr2:80720420-80724887 + Intergenic
ENSMUSG00000084297 UCSC
Rpl36aP3 chr3:136654342-136654725 + Intergenic
ENSMUSG00000105327 UCSC
Rpl36aP4 chr3:145584743-145585136 + Intragenic
ENSMUSG00000105388 UCSC
Rpl36aP6 chr4:126478204-126478629 - Intragenic
ENSMUSG00000081319 UCSC
Rpl36aP8 chr7:13214623-13215026 + Intergenic
ENSMUSG00000107687 UCSC
Rpl36aP10 chr8:34619842-34620171 + Intergenic
ENSMUSG00000110247 UCSC
Rpl36aP24 chrX:84475457-84475747 + Intergenic
ENSMUSG00000083839 UCSC
Rpl36aP19 chr14:99231310-99231781 - Intergenic
ENSMUSG00000060377 UCSC
Rpl36aP5 chr3:84082018-84082500 + Intragenic
Intragenic
ENSMUSG00000104043 UCSC
Rpl36aP7 chr5:146915662-146915847 - Intergenic
N/A UCSC
Rpl36aP9 chr7:132209455-132209687 + Intergenic
N/A UCSC
Rpl36aP13 chr12:31944558-31945000 - Intragenic
N/A UCSC
Rpl36aP14 chr12:3696006-3696426 - Intragenic
N/A UCSC
Rpl36aP15 chr12:69229589-69229918 - Intergenic
N/A UCSC
Rpl36aP17 chr13:34282980-34283115 + Intergenic
N/A UCSC
Rpl36aP22 chr19:34660766-34660949 - Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_019865.5
GCCTATAAACTTCCGTTGCGGCTCTAGCCTCTCTCTTTCCGAGCTGCTAGCGCTCCTGCGAACATGGTGAACGTGCCTAAAACCCGCCGGACATTCTGCAAGAAATGTGGGAAGCACCAACCCCACAAGGTGACACAGTACAAGAAGGGCAAGGATTCTTTGTATGCCCAGGGAAAGCGGCGTTACGACAGGAAACAGAGTGGCTATGGTGGGCAGACTAAGCCTATTTTCCGCAAAAAGGCTAAAACTACAAAGAAGATTGTGCTGAGACTGGAGTGCGTTGAGCCCAACTGCAGATCTAAGAGGATGCTGGCTATTAAGAGATGCAAGCATTTTGAATTGGGAGGCGACAAGAAGAGAAAGGGCCAAGTGATCCAGTTCTAAGCAGATTTTGTTATGAAGACAATAAAATCTTGACCTTTCAACCCCTTTGATTGCAGTTGTTCGTTTGGGAGGGAATACATTAAAAGCTTTCAGAAATTACCTGAA