Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps14
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S14
Also known as 2600014J02Rik
Coordinate chr18:60907668-60911618
Strand +
Gene summary Predicted to enable mRNA 5'-UTR binding activity; small ribosomal subunit rRNA binding activity; and translation regulator activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in several processes, including erythrocyte differentiation; negative regulation of transcription by RNA polymerase II; and ribosomal small subunit biogenesis. Located in mitochondrion. Is expressed in early conceptus and metanephros. Human ortholog(s) of this gene implicated in chromosome 5q deletion syndrome. Orthologous to human RPS14 (ribosomal protein S14). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps14

Retroname Coord Strand Genomic Region ENSG
Rps14P9 chr11:19310876-19311081 - Intergenic
ENSMUSG00000081054 UCSC
Rps14P11 chr15:81856573-81857094 + Intergenic
ENSMUSG00000061848 UCSC
Rps14P2 chr2:59226900-59227260 + Intergenic
ENSMUSG00000083276 UCSC
Rps14P1 chr2:103062991-103063235 - Intergenic
ENSMUSG00000084385 UCSC
Rps14P3 chr3:22075322-22075855 + Intergenic
ENSMUSG00000106527 UCSC
Rps14P4 chr3:53599795-53600337 - Intergenic
ENSMUSG00000105879 UCSC
Rps14P5 chr3:87875461-87875986 + Intergenic
ENSMUSG00000103792 UCSC
Rps14P7 chr4:98743947-98744320 + Intergenic
ENSMUSG00000084188 UCSC
Rps14P10 chr13:91368558-91369089 + Intragenic
Intragenic
ENSMUSG00000091419 UCSC
Rps14P6 chr4:123237631-123237888 - Intragenic
N/A UCSC
Rps14P8 chr9:48990255-48990669 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_020600.4
AGAGATACACTTCCGGAAGACGGAAGTGACCCGTCCGCCCGCCCCTTCCGCCTCTCTCTTTCCGGTGGAGGAGTCTGGAGACGACGATCAGAAATGGCGCCACgcaaggggaaggaaaagaaggaagagcaggTCATCAGCCTGGGACCTCAGGTGGCTGAGGGAGAGAATGTGTTTGGTGTCTGCCACATCTTTGCATCCTTCAATGACACCTTTGTCCATGTTACCGATCTTTCTGGCAAGGAAACCATCTGCCGAGTGACTGGTGGGATGAAGGTGAAGGCTGACCGAGATGAGTCCTCTCCATATGCAGCCATGTTGGCTGCCCAGGATGTGGCCCAGAGGTGCAAGGAGTTGGGCATCACTGCCCTGCACATCAAACTCCGGGCCACAGGAGGAAACAGGACCAAGACCCCTGGACCTGGAGCCCAGTCAGCCCTCAGAGCTCTTGCTCGCTCTGGGATGAAGATTGGGCGGATTGaggATGTCACCCCCATTCCCTCTGATAGCACTCGAAGAAAAGGGGGTCGTCGTGGTCGCCGTCTGTGAACAGGACTTCTCATTATTTTCTGTTAATAAATTGCTTTGTGTAAGCTA