Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps15
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S15
Also known as rig
Coordinate chr10:80128265-80129948
Strand +
Gene summary Predicted to enable MDM2/MDM4 family protein binding activity and ubiquitin ligase inhibitor activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in positive regulation of signal transduction by p53 class mediator and ribosome biogenesis. Predicted to be located in cytosolic ribosome and nucleoplasm. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human RPS15 (ribosomal protein S15). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps15

Retroname Coord Strand Genomic Region ENSG
Rps15P8 chr12:11810418-11810841 - Intergenic
ENSMUSG00000112413 UCSC
Rps15P1 chr1:7068464-7068759 + Intergenic
ENSMUSG00000102534 UCSC
Rps15P7 chr10:116808638-116809134 - Intergenic
ENSMUSG00000111966 UCSC
Rps15P9 chr14:47657176-47657666 - Intergenic
ENSMUSG00000115436 UCSC
Rps15P2 chr3:40613344-40613565 - Intragenic
ENSMUSG00000089932 UCSC
Rps15P3 chr4:127302153-127302612 - Intergenic
ENSMUSG00000079998 UCSC
Rps15P5 chr6:57994468-57994961 + Intergenic
ENSMUSG00000071419 UCSC
Rps15P6 chr8:128287901-128288371 + Intragenic
ENSMUSG00000090074 UCSC
Rps15P11 chrX:75030765-75031247 - Intergenic
ENSMUSG00000082755 UCSC
Rps15P4 chr6:122621226-122621729 + Intergenic
N/A UCSC
Rps15P10 chr18:64421407-64421905 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001310726.1
TGCTCCCGGGTATCCGTCGCCATCCTCCCGGGGCCCTTTCGCAAGACTCTGGACTCGCTGCCTGGGGATGTAGCGATGTGCTCGGGTGCCCGGAGACTGCGGATGGCGGGCCGAAGTGGAGCAGAAGAAGAAGCGCACCTTCCGCAAGTTCACCTACCGTGGCGTAGACCTCGACCAACTGCTCGACATGTCCTATGAGCAACTGATGCAGCTGTACAGCGCCCGCCAGAGGAGGCGCCTGAACCGTGGTCTTCGGCGGAAGCAACACTCACTGCTCAAGCGCTTGAGAAAGGCCAAAAAGGAGGCACCACCCATGGAGAAGCCTGAGGTGGTGAAGACGCACCTGAGGGACATGATCATCCTGCCGGAGATGGTGGGTAGCATGGTGGGCGTGTACAACGGCAAGACCTTCAACCAGGTGGAGATCAAACCAGAGATGATCGGCCACTACCTGGGCGAGTTCTCCATCACCTACAAACCCGTGAAGCACGGCCGGCCCGGGATCGGTGCCACCCACTCCTCCCGATTCATCCCCCTCAAGTAGCCGAGGCCAATAAAGACTGGTTTTGGTCCCTgga
>NM_009091.2
GATAACTGCGCAAGCGCAGCCCGTACTTCCTTTTCCGAGTAACCGCCAAGATGGCCGAAGTGGAGCAGAAGAAGAAGCGCACCTTCCGCAAGTTCACCTACCGTGGCGTAGACCTCGACCAACTGCTCGACATGTCCTATGAGCAACTGATGCAGCTGTACAGCGCCCGCCAGAGGAGGCGCCTGAACCGTGGTCTTCGGCGGAAGCAACACTCACTGCTCAAGCGCTTGAGAAAGGCCAAAAAGGAGGCACCACCCATGGAGAAGCCTGAGGTGGTGAAGACGCACCTGAGGGACATGATCATCCTGCCGGAGATGGTGGGTAGCATGGTGGGCGTGTACAACGGCAAGACCTTCAACCAGGTGGAGATCAAACCAGAGATGATCGGCCACTACCTGGGCGAGTTCTCCATCACCTACAAACCCGTGAAGCACGGCCGGCCCGGGATCGGTGCCACCCACTCCTCCCGATTCATCCCCCTCAAGTAGCCGAGGCCAATAAAGACTGGTTTTGGTCCCTgga