Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps16
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S16
Also known as -
Coordinate chr7:28050114-28052123
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within cellular response to leukemia inhibitory factor. Predicted to be located in cytosolic ribosome. Predicted to be part of cytosolic small ribosomal subunit. Is expressed in early conceptus and secondary oocyte. Orthologous to human RPS16 (ribosomal protein S16). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps16

Retroname Coord Strand Genomic Region ENSG
Rps16P9 chr11:22736754-22737251 - Intergenic
ENSMUSG00000082576 UCSC
Rps16P11 chr18:60911991-60912467 - Intergenic
ENSMUSG00000080779 UCSC
Rps16P2 chr2:87470618-87471110 - Intergenic
ENSMUSG00000082428 UCSC
Rps16P1 chr2:167123288-167123698 - Intergenic
ENSMUSG00000083661 UCSC
Rps16P3 chr5:129205083-129205635 - Intragenic
ENSMUSG00000060419 UCSC
Rps16P4 chr6:38261368-38261947 + Intergenic
ENSMUSG00000107026 UCSC
Rps16P7 chr8:10858661-10859132 - Intergenic
ENSMUSG00000096258 UCSC
Rps16P8 chr8:48085306-48085856 - Intergenic
ENSMUSG00000062458 UCSC
Rps16P5 chr7:126324823-126325126 - Intergenic
N/A UCSC
Rps16P6 chr7:133010466-133010957 - Intragenic
N/A UCSC
Rps16P10 chr11:30159082-30159240 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_013647.2
ACGTAGCACTCAATGCGCCTGCGCAGACCCTGAAAAATCGGCTGGGTTGGCCCCGCGCTTCCCTTTTCCGGTCGCGGCGCTGCGCGGTGTGGAGCTCGTGCTTGTGCTCGGAGCTATGCCGTCCAAGGGTCCGCTGCAGTCCGTGCAGGTCTTCGGACGCAAGAAAACAGCCACGGCTGTGGCCCACTGCAAACGGGGAAATGGGCTCATCAAGGTGAACGGACGTCCCCTGGAGATGATCGAGCCGCGCACGCTGCAGTACAAGTTACTggagcctgttttgcttctgGGCAAGGAGCGATTTGCTGGTGTGGATATTCGGGTCCGTGTGAAGGGTGGTGGACATGTGGCCCAAATTTATGCCATCCGACAGTCCATCTCAAAGGCCCTGGTAGCTTATTACCAAAAATATGTGGATGAAGCCTCCAAGAAGGAGATCAAAGATATCCTCATCCAATACGATCGGACCCTGCTTGTAGCTGACCCCCGTCGCTGCGAATCCAAAAAGTTTGGAGGTCCTGGTGCCCGTGCCCGATACCAGAAATCCTACCGATAAGCCCATCTCAAGGATCGGGGTTTACCTTTGTAATAAACATCCTAGGATTTTAACGTTCC