Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps17
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S17
Also known as -
Coordinate chr7:80992481-80994982
Strand -
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in erythrocyte homeostasis; rRNA processing; and ribosomal small subunit biogenesis. Predicted to act upstream of or within translation. Located in synapse. Is expressed in cerebral cortex ventricular layer and retina. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 4. Orthologous to human RPS17 (ribosomal protein S17). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps17

Retroname Coord Strand Genomic Region ENSG
Rps17P4 chr10:38804263-38804717 + Intergenic
ENSMUSG00000111431 UCSC
Rps17P6 chr11:20396410-20396846 + Intergenic
ENSMUSG00000083878 UCSC
Rps17P7 chr12:100710749-100711223 - Intergenic
ENSMUSG00000113113 UCSC
Rps17P8 chr12:118566383-118566843 + Intergenic
ENSMUSG00000114034 UCSC
Rps17P9 chr13:41388138-41388470 - Intergenic
ENSMUSG00000114238 UCSC
Rps17P10 chr13:98953239-98953773 + Intergenic
ENSMUSG00000114719 UCSC
Rps17P12 chr14:57454664-57455132 + Intergenic
ENSMUSG00000114754 UCSC
Rps17P13 chr15:54175320-54175791 - Intergenic
ENSMUSG00000050978 UCSC
Rps17P14 chr17:30614557-30615031 - Intragenic
ENSMUSG00000117962 UCSC
Rps17P15 chr19:61293276-61293741 - Intergenic
ENSMUSG00000118197 UCSC
Rps17P1 chr4:47071588-47071977 - Intergenic
ENSMUSG00000084199 UCSC
Rps17P3 chr9:114476658-114477120 - Intergenic
ENSMUSG00000111744 UCSC
Rps17P16 chrX:51861182-51861649 - Intergenic
ENSMUSG00000083621 UCSC
Rps17P2 chr7:115672890-115673215 + Intergenic
N/A UCSC
Rps17P5 chr10:55427154-55427312 + Intergenic
N/A UCSC
Rps17P11 chr14:114848818-114849248 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_009092.3
ctgtttcctctttTACCGAGACCCGCCAACATGGGCCGCGTTCGCACCAAGACCGTGAAGAAGGCTGCCCGGGTCATCATCGAGAAGTACTACACGCGTCTGGGTAATGACTTCCACACCAACAAGCGCGTGTGCGAGGAGATCGCCATTATCCCCAGCAAGAAGCTTCGGAACAAGATAGCCGGCTATGTCACGCATCTGATGAAGCGGATTCAGAGAGGGCCTGTGAGAGGCATCTCTATCAAGttgcaggaagaagagagagagaggagagataacTACGTTCCTGAGGTCTCAGCCCTAGATCAGGAGATCATTGAGGTGGATCCCGACACCAAGGAGATGCTGAAGCTCCTGGACTTTGGCAGTCTCTCTAACCTTCAGGTCACTCAGCCTACAGTTGGCATGAATTTCAAAACACCACGTGGAGCTGTTTAATCTGTTATGCCATATTTTCAATAAACCTGAAAACAA