Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps18
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S18
Also known as H-2Ke3|H2-Ke3|Ke-3|ke3
Coordinate chr17:34170972-34174639
Strand -
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Is active in synapse. Is expressed in several structures, including brain; genitourinary system; heart; hemolymphoid system gland; and liver. Orthologous to human RPS18 (ribosomal protein S18). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps18

Retroname Coord Strand Genomic Region ENSG
Rps18P14 chr10:29490111-29490466 - Intergenic
ENSMUSG00000111046 UCSC
Rps18P15 chr10:83737714-83738039 + Intergenic
ENSMUSG00000112133 UCSC
Rps18P17 chr13:61858352-61858806 - Intergenic
ENSMUSG00000061330 UCSC
Rps18P20 chr16:22998278-22998797 + Intergenic
ENSMUSG00000084299 UCSC
Rps18P21 chr16:31789134-31789666 - Intragenic
ENSMUSG00000083853 UCSC
Rps18P23 chr17:9321467-9322004 + Intergenic
ENSMUSG00000117205 UCSC
Rps18P2 chr3:71308376-71308916 - Intergenic
ENSMUSG00000102666 UCSC
Rps18P6 chr4:8941454-8941680 + Intergenic
ENSMUSG00000083786 UCSC
Rps18P4 chr4:53877925-53878371 + Intergenic
ENSMUSG00000083985 UCSC
Rps18P5 chr4:71288931-71289474 - Intergenic
ENSMUSG00000083914 UCSC
Rps18P3 chr4:149585049-149585365 + Intergenic
ENSMUSG00000083811 UCSC
Rps18P7 chr6:66688631-66689176 + Intergenic
ENSMUSG00000107591 UCSC
Rps18P9 chr7:6021977-6022511 + Intragenic
ENSMUSG00000064231 UCSC
Rps18P8 chr7:113807822-113808363 - Intergenic
ENSMUSG00000110407 UCSC
Rps18P11 chr8:34974317-34974861 + Intragenic
ENSMUSG00000109580 UCSC
Rps18P12 chr8:80216419-80216863 - Intergenic
ENSMUSG00000109851 UCSC
Rps18P10 chr8:107989377-107989923 - Intragenic
ENSMUSG00000057657 UCSC
Rps18P13 chr9:83379803-83380117 + Intergenic
ENSMUSG00000100027 UCSC
Rps18P24 chrX:57473018-57473437 - Intergenic
ENSMUSG00000084305 UCSC
Rps18P25 chrX:93068042-93068273 + Intergenic
ENSMUSG00000081055 UCSC
Rps18P16 chr13:28441577-28442121 + Intergenic
ENSMUSG00000113061 UCSC
Rps18P19 chr13:97896594-97897139 - Intragenic
ENSMUSG00000069117 UCSC
Rps18P1 chr3:69580748-69580910 - Intragenic
N/A UCSC
Rps18P18 chr13:62365314-62365800 - Intergenic
N/A UCSC
Rps18P22 chr17:75288793-75288953 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_011296.3
CTCTCTTCCACAGGAGGCCTACACGCCGCCGTCTGTGCCGCCGCCATGTCTCTAGTGATCCCTGAGAAGTTCCAGCACATTTTGCGAGTACTCAACACCAACATCGATGGGCGGCGGAAAATAGCCTTCGCCATCACTGCCATTAAGGGCGTGGGGCGGAGATATGCTCATGTGGTGTTGAGGAAAGCAGACATCGACCTCACCAAGAGGGCTGGAGAACTCACGGAGGATGAGGTGGAGCGAGTGATCACCATCATGCAGAACCCACGACAGTACAAGATCCCAGACTGGTTCCTGAACAGACAGAAGGATGTGAAGGATGGGAAGTACAGCCAGGTTCTGGCCAACGGTCTAGACAACAAGCTGCGTGAGGACCTGGAGAGGCTGAAGAAAATTCGAGCCCATAGAGGGCTGCGCCACTTTTGGGGCCTTCGTGTCCGCGGTCAGCACACCAAGACCACTGGCCGCAGGGGCCGAACTGTGGGTGTATCCAAGAAGAAATGAGTCTCTGGGCCTTTGCTGTTAATAAATAGTTTATATACCTATGAC