Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps19
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S19
Also known as Dsk3
Coordinate chr7:24584017-24589236
Strand +
Gene summary Predicted to enable several functions, including fibroblast growth factor binding activity; identical protein binding activity; and translation initiation factor binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within Notch signaling pathway. Is active in synapse. Is expressed in early conceptus. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia and Diamond-Blackfan anemia 1. Orthologous to human RPS19 (ribosomal protein S19). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps19

Retroname Coord Strand Genomic Region ENSG
Rps19P7 chr6:52108729-52108894 - Intergenic
ENSMUSG00000082781 UCSC
Rps19P10 chr7:79887324-79887685 - Intragenic
ENSMUSG00000082954 UCSC
Rps19P11 chr8:41136496-41136688 - Intragenic
ENSMUSG00000109658 UCSC
Rps19P12 chr8:70208809-70209046 + Intergenic
N/A UCSC
Rps19P8 chr6:87925413-87925861 - Intergenic
ENSMUSG00000068689 UCSC
Rps19P15 chr10:43249440-43249948 - Intragenic
ENSMUSG00000089839 UCSC
Rps19P16 chr10:52260721-52261217 - Intergenic
ENSMUSG00000089800 UCSC
Rps19P14 chr10:126021726-126022255 - Intergenic
ENSMUSG00000112632 UCSC
Rps19P17 chr12:110864512-110865022 + Intragenic
ENSMUSG00000096942 UCSC
Rps19P21 chr14:53140214-53140726 + Intergenic
ENSMUSG00000094974 UCSC
Rps19P23 chr16:79711308-79711795 - Intergenic
ENSMUSG00000097552 UCSC
Rps19P24 chr18:40859297-40859799 + Intergenic
ENSMUSG00000095150 UCSC
Rps19P1 chr2:139914912-139915426 - Intergenic
ENSMUSG00000080006 UCSC
Rps19P4 chr3:117682179-117682728 - Intergenic
ENSMUSG00000104678 UCSC
Rps19P5 chr4:147906194-147906702 - Intragenic
ENSMUSG00000080059 UCSC
Rps19P6 chr5:108203323-108203817 - Intergenic
ENSMUSG00000096920 UCSC
Rps19P2 chr2:150444039-150444237 - Intragenic
N/A UCSC
Rps19P9 chr7:19747419-19747893 - Intragenic
N/A UCSC
Rps19P19 chr12:87114249-87114410 + Intragenic
ENSMUSG00000080868 UCSC
Rps19P20 chr13:24475343-24475748 - Intergenic
ENSMUSG00000083409 UCSC
Rps19P22 chr15:37868137-37868768 + Intergenic
ENSMUSG00000097679 UCSC
Rps19P25 chr18:42385442-42385939 + Intragenic
Intragenic
Intragenic
ENSMUSG00000096699 UCSC
Rps19P3 chr3:116638311-116638644 + Intergenic
ENSMUSG00000105250 UCSC
Rps19P26 chrX:102380420-102380896 + Intergenic
ENSMUSG00000081280 UCSC
Rps19P13 chr9:51989513-51990027 - Intragenic
Intragenic
Intragenic
N/A UCSC
Rps19P18 chr12:118851929-118852123 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001360115.1
GGAGGGCTCTCCCACGCGGTCACCACGCCGCGGTGCTGCGATCCGCGTGGCGTGTGCACCCGGCAACTCTGTTGGACCTGCAGGAGCCGAGTTGCAGGGACATGAGGCTGGGTGGATGCTGAGGCTTTGGGGTGGACTGGCGACGAGCAGGATGCCCGGAGTTACTGTAAAAGACGTTAACCAGCAGGAGTTCGTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTCCGGGAAGCTGAAAGTCCCCGAATGGGTGGACACAGTCAAGCTGGCCAAACATAAAGAGCTTGCCCCATATGATGAGAACTGGTTCTACACACGAGCTGCTTCCACAGCACGGCACCTGTACCTCCGAGGTGGTGCTGGGGTTGGTTCCATGACCAAGATCTATGGAGGACGGCAGAGAAACGGTGTCAGACCCAGCCATTTCAGCAGAGGCTCTAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCTGAAAATGGTGGAAAAGGACCAAGATGGGGGCCGCAAGCTGACGCCTCAGGGACAGAGAGACCTGGACAGGATCGCTGGACAGGTGGCAGCTGCCAACAAGAAGCATTAGAACAAAGGATGCTGGGTTAATAAATTGCCTCATTCATAATCCTG
>NM_001360116.1
GGGCTCTGGGTCGCGGCTGTGCGCGGGGCCACGGGGCCGGGCTTTCTGGCCCCAAGAGCTCGTGCCGGGACCGCGGGAAGCCCGGCGCGGGGTCGCTCCGCCCTCTGGAGCCGCGGCCACGTGCGAGCGGCAGGCCCGGACATGCCTGATCGCCGCAATCCGGGAGCCCGGAGGATGCCCGGAGTTACTGTAAAAGACGTTAACCAGCAGGAGTTCGTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTCCGGGAAGCTGAAAGTCCCCGAATGGGTGGACACAGTCAAGCTGGCCAAACATAAAGAGCTTGCCCCATATGATGAGAACTGGTTCTACACACGAGCTGCTTCCACAGCACGGCACCTGTACCTCCGAGGTGGTGCTGGGGTTGGTTCCATGACCAAGATCTATGGAGGACGGCAGAGAAACGGTGTCAGACCCAGCCATTTCAGCAGAGGCTCTAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCTGAAAATGGTGGAAAAGGACCAAGATGGGGGCCGCAAGCTGACGCCTCAGGGACAGAGAGACCTGGACAGGATCGCTGGACAGGTGGCAGCTGCCAACAAGAAGCATTAGAACAAAGGATGCTGGGTTAATAAATTGCCTCATTCATAATCCTG
>NM_001360119.1
GACTCGACGCCCGACTTGTGCGCCCGGGAAACCCCGTCGTTCCCTTTCCCCTGGCTGGCAGCGCGGAGGCCGCACGATGCCCGGAGTTACTGTAAAAGACGTTAACCAGCAGGAGTTCGTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTCCGGGAAGCTGAAAGTCCCCGAATGGGTGGACACAGTCAAGCTGGCCAAACATAAAGAGCTTGCCCCATATGATGAGAACTGGTTCTACACACGAGCTGCTTCCACAGCACGGCACCTGTACCTCCGAGGTGGTGCTGGGGTTGGTTCCATGACCAAGATCTATGGAGGACGGCAGAGAAACGGTGTCAGACCCAGCCATTTCAGCAGAGGCTCTAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCTGAAAATGGTGGAAAAGGACCAAGATGGGGGCCGCAAGCTGACGCCTCAGGGACAGAGAGACCTGGACAGGATCGCTGGACAGGTGGCAGCTGCCAACAAGAAGCATTAGAACAAAGGATGCTGGGTTAATAAATTGCCTCATTCATAATCCTG
>NM_023133.2
GGGCTCTGGGTCGCGGCTGTGCGCGGGGCCACGGGGCCGGGCTTTCTGGCCCCAAGAGCTCGTGCCGGGACCGCGGGAAGCCCGGCGCGGGGTCGCTCCGCCCTCTGGAGCCGCGGCCACGTGCGAGCGGCAGGCCCGGACATGCCTGATCGCCGCAATCCGGGAGCCCGGAGGGTTAGGTGGGCAGCGGAGGGATGCCCGGAGTTACTGTAAAAGACGTTAACCAGCAGGAGTTCGTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTCCGGGAAGCTGAAAGTCCCCGAATGGGTGGACACAGTCAAGCTGGCCAAACATAAAGAGCTTGCCCCATATGATGAGAACTGGTTCTACACACGAGCTGCTTCCACAGCACGGCACCTGTACCTCCGAGGTGGTGCTGGGGTTGGTTCCATGACCAAGATCTATGGAGGACGGCAGAGAAACGGTGTCAGACCCAGCCATTTCAGCAGAGGCTCTAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCTGAAAATGGTGGAAAAGGACCAAGATGGGGGCCGCAAGCTGACGCCTCAGGGACAGAGAGACCTGGACAGGATCGCTGGACAGGTGGCAGCTGCCAACAAGAAGCATTAGAACAAAGGATGCTGGGTTAATAAATTGCCTCATTCATAATCCTG