Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps29
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S29
Also known as -
Coordinate chr12:69204496-69205960
Strand -
Gene summary Predicted to enable zinc ion binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation and positive regulation of apoptotic process. Predicted to act upstream of or within translation. Predicted to be located in polysomal ribosome. Predicted to be part of cytosolic small ribosomal subunit. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and liver and biliary system. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 13. Orthologous to human RPS29 (ribosomal protein S29). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps29

Retroname Coord Strand Genomic Region ENSG
Rps29P1 chr1:171369228-171369520 + Intergenic
ENSMUSG00000103980 UCSC
Rps29P13 chr13:64358319-64358595 + Intragenic
ENSMUSG00000113804 UCSC
Rps29P14 chr13:74136993-74137284 - Intragenic
ENSMUSG00000113923 UCSC
Rps29P15 chr15:12198302-12198582 - Intergenic
ENSMUSG00000115356 UCSC
Rps29P2 chr2:172351349-172351657 - Intergenic
ENSMUSG00000081344 UCSC
Rps29P6 chr5:33916678-33916971 + Intragenic
ENSMUSG00000059064 UCSC
Rps29P4 chr5:135035406-135035690 + Intergenic
ENSMUSG00000084392 UCSC
Rps29P5 chr5:144660345-144660620 - Intergenic
ENSMUSG00000082524 UCSC
Rps29P9 chr6:92248309-92248510 - Intergenic
ENSMUSG00000108140 UCSC
Rps29P7 chr6:112953142-112953430 + Intergenic
ENSMUSG00000094189 UCSC
Rps29P8 chr6:148802377-148802667 - Intragenic
ENSMUSG00000095288 UCSC
Rps29P10 chr7:100710427-100710685 - Intergenic
ENSMUSG00000109171 UCSC
Rps29P12 chr9:58603042-58603329 - Intragenic
ENSMUSG00000093473 UCSC
Rps29P19 chrX:7913428-7913726 + Intergenic
ENSMUSG00000068243 UCSC
Rps29P3 chr2:53306006-53306164 - Intergenic
N/A UCSC
Rps29P11 chr7:132750239-132750533 - Intragenic
N/A UCSC
Rps29P16 chr19:28750645-28750773 + Intergenic
N/A UCSC
Rps29P17 chrX:163058926-163059178 - Intragenic
Intragenic
N/A UCSC
Rps29P18 chrX:50109862-50109996 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_009093.2
GTTGTCGCACGGCGTACGCGTCACGTCTTAGCGTTGTATTCTGGGTAGCGTGTAGCTCCAAAAAACTTTGAAGAGCGCCTGCGCGAGCCGACTCGTTCCTTTCTCCTCGTTGGGCGTCTGAAGGCAAGATGGGTCACCAGCAGCTCTACTGGAGTCACCCACGGAAGTTCGGCCAGGGTTCCCGCTCTTGCCGCGTCTGCTCCAACCGCCACGGTCTGATCCGCAAATACGGGCTGAACATGTGCCGCCAGTGCTTCCGGCAGTACGCGAAGGACATAGGCTTCATTAAGttggaCTAAGCGACCTTGAATGGATTCGACTGACTACTACCAAGTGGAACCGATCATGCTAGTCtttgtacacaaagaataaaaatgtgaagaactttaa