Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps4x
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S4, X-linked
Also known as Rps4|Rps4-1
Coordinate chrX:101228547-101232997
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Is active in synapse. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and sensory organ. Orthologous to several human genes including RPS4X (ribosomal protein S4 X-linked). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps4x

Retroname Coord Strand Genomic Region ENSG
Rps4xP1 chr1:148526065-148526880 - Intergenic
ENSMUSG00000101735 UCSC
Rps4xP12 chr11:60339997-60340636 - Intergenic
ENSMUSG00000084249 UCSC
Rps4xP13 chr13:3348868-3349755 + Intergenic
ENSMUSG00000114003 UCSC
Rps4xP14 chr13:35049694-35050583 - Intergenic
ENSMUSG00000114127 UCSC
Rps4xP15 chr18:8051179-8052084 + Intergenic
ENSMUSG00000117428 UCSC
Rps4xP3 chr2:83183416-83184316 - Intergenic
ENSMUSG00000081400 UCSC
Rps4xP2 chr2:121549487-121549693 + Intragenic
ENSMUSG00000084244 UCSC
Rps4xP4 chr3:112209663-112210568 + Intergenic
ENSMUSG00000105077 UCSC
Rps4xP5 chr4:98991186-98992070 - Intragenic
ENSMUSG00000081733 UCSC
Rps4xP6 chr5:3925338-3926242 + Intergenic
ENSMUSG00000104699 UCSC
Rps4xP9 chr7:33578692-33579632 + Intergenic
ENSMUSG00000081317 UCSC
Rps4xP10 chr7:42603016-42603835 - Intragenic
ENSMUSG00000044609 UCSC
Rps4xP11 chr7:86891270-86892107 - Intragenic
ENSMUSG00000108816 UCSC
Rps4xP8 chr7:114526507-114526862 - Intergenic
ENSMUSG00000046411 UCSC
Rps4xP16 chrX:138614352-138615254 - Intragenic
ENSMUSG00000098559 UCSC
Rps4xP7 chr6:148256204-148256990 + Intragenic
ENSMUSG00000063171 UCSC

Expression

Transcript Sequences

>NM_009094.2
GCAACCCAGGCTCCAGCGCGCGCGCAGCCTCCGACCCTAATTTCTTCGTTCGCCGGAAGAAGGCGAGTCTCTTTCCGTTCCTAGCGCAGCCATGGCTCGTGGTCCCAAGAAACACCTGAAGCGTGTAGCTGCTCCAAAACATTGGATGCTGGATAAGTTGACTGGCGTGTTTGCTCCTCGTCCATCCACTGGTCCTCACAAGCTGAGGGAATGCCTGCCTCTCATCATTTTCCTAAGGAACAGACTTAAGTATGCCCTGACTGGAGATGAAGTAAAAAAGATTTGCATGCAGCGATTCATTAAGATTGATGGGAAAGTCAGGACCGATATAACCTACCCTGCTGGGTTTATGGATGTCATCAGCATTGACAAGACCGGAGAGAACTTCCGTCTGATCTATGACACCAAGGGTCGCTTTGCTGTTCATCGTATTACACCGGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAAAGATCTTTGTAGGCACAAAAGGAATCCCGCACCTGGTGACCCATGATGCTCGTACTATTCGGTACCCTGATCCCCTCATCAAGGTGAACGACACCATTCAGATTGATTTGGAGACAGGCAAAATAACTGACTTCATCAAGTTTGACACTGGGAACCTGTGTATGGTGACTGGAGGTGCTAACTTGGGAAGAATTGGTGTAATCACCAACAGAGAGAGACATCCCGGCTCTTTTGATGTGGTTCATGTGAAAGATGCCAATGGCAACAGCTTTGCCACTCGGCTGTCCAACATTTTTGTTATTGGCAAGGGTAACAAACCATGGATCTCTCTTCCCAGAGGAAAAGGAATCCGCCTCACCATTGctgaagagagagacaagaggcTTGCGGCCAAACAGAGCAGTGGGTGAAATGGTCTCTAGGAGACATGCTGGAaaagtgtttgtacaagcctTTCTAGGCAACATACATGCTAGATTAAACAGCATGGTGAAACTAC