Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps7
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S7
Also known as Mtu|Rps7A|S7
Coordinate chr12:28680846-28685952
Strand -
Gene summary Predicted to enable mRNA binding activity; protein kinase binding activity; and ubiquitin ligase inhibitor activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within cell differentiation and neural tube closure. Is active in synapse. Is expressed in brain and pancreas epithelium. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 8. Orthologous to human RPS7 (ribosomal protein S7). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps7

Retroname Coord Strand Genomic Region ENSG
Rps7P23 chr12:31248346-31248550 - Intergenic
ENSMUSG00000111944 UCSC
Rps7P22 chr12:106512166-106512485 - Intergenic
ENSMUSG00000091887 UCSC
Rps7P24 chr13:12186389-12186974 - Intergenic
ENSMUSG00000113848 UCSC
Rps7P26 chr14:9815898-9816405 - Intragenic
ENSMUSG00000114312 UCSC
Rps7P27 chr18:64270059-64270643 - Intergenic
ENSMUSG00000118189 UCSC
Rps7P29 chr19:9193708-9194362 + Intergenic
ENSMUSG00000117804 UCSC
Rps7P28 chr19:23597061-23597717 + Intragenic
ENSMUSG00000044424 UCSC
Rps7P1 chr2:34326290-34326569 - Intragenic
ENSMUSG00000083233 UCSC
Rps7P3 chr3:96320302-96320684 - Intergenic
ENSMUSG00000095836 UCSC
Rps7P4 chr4:123168670-123169300 - Intergenic
ENSMUSG00000082634 UCSC
Rps7P6 chr5:87884930-87885070 - Intergenic
ENSMUSG00000105796 UCSC
Rps7P5 chr5:137599824-137600470 + Intergenic
ENSMUSG00000105408 UCSC
Rps7P7 chr6:66710918-66711154 - Intergenic
ENSMUSG00000107721 UCSC
Rps7P8 chr6:67391382-67392074 - Intergenic
ENSMUSG00000096086 UCSC
Rps7P10 chr7:55111809-55112362 + Intergenic
ENSMUSG00000108744 UCSC
Rps7P9 chr7:124818669-124819122 - Intergenic
ENSMUSG00000073844 UCSC
Rps7P12 chr8:19761109-19761760 - Intragenic
ENSMUSG00000110531 UCSC
Rps7P13 chr8:20594699-20595014 - Intergenic
ENSMUSG00000110589 UCSC
Rps7P14 chr8:21136445-21137111 - Intergenic
ENSMUSG00000110574 UCSC
Rps7P15 chr8:56426639-56427300 - Intragenic
ENSMUSG00000110164 UCSC
Rps7P16 chr8:57744520-57745010 - Intergenic
ENSMUSG00000110327 UCSC
Rps7P17 chr8:69993554-69993962 + Intergenic
ENSMUSG00000110434 UCSC
Rps7P18 chr8:89447694-89448280 - Intragenic
ENSMUSG00000109970 UCSC
Rps7P11 chr8:104797726-104798401 + Intragenic
ENSMUSG00000110019 UCSC
Rps7P20 chr9:4228773-4229072 - Intragenic
ENSMUSG00000110461 UCSC
Rps7P19 chr9:40398959-40399630 + Intragenic
Intragenic
ENSMUSG00000111515 UCSC
Rps7P21 chr9:98183657-98184315 + Intragenic
ENSMUSG00000101452 UCSC
Rps7P33 chrX:41012095-41012710 - Intragenic
ENSMUSG00000080798 UCSC
Rps7P30 chrX:136000230-136000882 + Intergenic
ENSMUSG00000080718 UCSC
Rps7P31 chrX:139722650-139723322 - Intragenic
ENSMUSG00000082165 UCSC
Rps7P32 chrX:151692498-151693188 - Intergenic
ENSMUSG00000083440 UCSC
Rps7P2 chr2:80112912-80113153 - Intergenic
N/A UCSC
Rps7P25 chr14:29626042-29626366 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_011300.3
CCACCTACTTCCGCTGTCCCCACCTCTTTTCTTCCGCCACCCGGATATGAGCCGTTCTCGCGAGAGCCGTCCCTCTTTCTAAGCCGGCGATCCGTCAGGGTGAAGCCATGTTCAGCTCGAGCGCCAAGATCGTGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCTGGCATCTCTCAGGCGCTGCTCGAGCTGGAGATGAACTCCGATCTCAAGGCGCAGCTGCGGGAACTCAACATCACCGCAGCCAAGGAAATCGAAGTTGGTGGTGGTCGGAAAGCTATCATAATTTTTGTACCAGTTCCTCAGCTTAAATCTTTCCAGAAAATCCAAGTCCGGCTAGTTCGTGAATTGGAGAAAAAGTTCAGTGGCAAGCACGTGGTCTTCATTGCTCAGAGGAGGATTCTGCCCAAGCCAACCCGGAAAAGCCGTACGAAAAATAAGCAGAAGCGCCCCAGAAGCCGTACCCTGACAGCAGTGCACGACGCCATCCTTGAGGACTTAGTCTTCCCAAGTGAAATTGTGGGTAAGAGGATCCGTGTGAAACTGGATGGCAGCCGGCTCATAAAAGTTCACTTAGACAAAGCACAGCAGAACAACGTGGAACACAAGGTTGAAACTTTTTCTGGTGTGTACAAGAAGCTCACAGGCAAGGATGTTAATTTTGAATTCCCAGAGTTTCAGTTGTAAAGAAAATGACTGAATAAAGTGTCATTCATAGTATTTGGTTGTAGTAACTTGTCAAAATCTCAGGGCCATGGGTGCACGACAGCAGTAGCTTCTTGAATGAACTGAAGTTTTCAAGAGGTGCCTGGAAGGTGAAAAACACACTGAAGCCAGTCATGTTGATATGGGGGCATTCTGCTGCTGTGAAACAGACTGGGGTTCACACCCACCTTGCGGGATTAGAACTTCACTGCCCTCCAACTTCTTTCTTTGTAAACAACTGTCCACATTTT