Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps8
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S8
Also known as -
Coordinate chr4:117011033-117013329
Strand -
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in cytosolic ribosome and endoplasmic reticulum. Predicted to be part of cytosolic small ribosomal subunit. Is expressed in brain. Orthologous to human RPS8 (ribosomal protein S8). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps8

Retroname Coord Strand Genomic Region ENSG
Rps8P4 chr1:6986723-6987231 + Intergenic
ENSMUSG00000102135 UCSC
Rps8P1 chr1:132953592-132954216 + Intragenic
ENSMUSG00000100228 UCSC
Rps8P2 chr1:150021756-150022326 + Intergenic
ENSMUSG00000101199 UCSC
Rps8P3 chr1:177614402-177615075 + Intragenic
Intragenic
ENSMUSG00000089657 UCSC
Rps8P25 chr10:35971814-35972480 + Intergenic
ENSMUSG00000110987 UCSC
Rps8P26 chr10:44728686-44729376 + Intergenic
ENSMUSG00000111671 UCSC
Rps8P27 chr10:56230504-56231193 - Intergenic
ENSMUSG00000071303 UCSC
Rps8P24 chr10:103403484-103403900 + Intergenic
ENSMUSG00000112644 UCSC
Rps8P29 chr12:69188205-69188894 - Intergenic
ENSMUSG00000083191 UCSC
Rps8P28 chr12:118721191-118721430 - Intergenic
ENSMUSG00000113633 UCSC
Rps8P32 chr13:26676495-26677202 + Intergenic
ENSMUSG00000060198 UCSC
Rps8P33 chr13:80641127-80641604 + Intergenic
ENSMUSG00000114528 UCSC
Rps8P31 chr13:118183827-118184478 + Intergenic
ENSMUSG00000114713 UCSC
Rps8P34 chr14:26286904-26287582 + Intergenic
ENSMUSG00000107911 UCSC
Rps8P35 chr14:58477809-58478289 + Intergenic
ENSMUSG00000114562 UCSC
Rps8P36 chr17:55695246-55695646 - Intergenic
ENSMUSG00000117090 UCSC
Rps8P37 chr18:13031453-13032072 + Intragenic
ENSMUSG00000080866 UCSC
Rps8P39 chr18:29379047-29379493 + Intergenic
ENSMUSG00000117638 UCSC
Rps8P40 chr18:81039995-81040588 - Intergenic
ENSMUSG00000118235 UCSC
Rps8P8 chr2:74716717-74717421 - Intergenic
ENSMUSG00000083837 UCSC
Rps8P5 chr2:175112322-175113010 + Intergenic
ENSMUSG00000084323 UCSC
Rps8P6 chr2:177151989-177152678 + Intergenic
ENSMUSG00000083619 UCSC
Rps8P11 chr3:74722019-74722673 + Intergenic
ENSMUSG00000102809 UCSC
Rps8P14 chr6:52095387-52095869 + Intergenic
ENSMUSG00000081979 UCSC
Rps8P15 chr6:83821467-83822107 - Intergenic
ENSMUSG00000107644 UCSC
Rps8P16 chr6:99816624-99817298 - Intergenic
ENSMUSG00000107713 UCSC
Rps8P13 chr6:109191174-109191861 + Intergenic
ENSMUSG00000107641 UCSC
Rps8P18 chr7:13066531-13067109 - Intragenic
ENSMUSG00000074547 UCSC
Rps8P19 chr7:39232637-39233137 - Intergenic
ENSMUSG00000099934 UCSC
Rps8P17 chr7:100173197-100173873 + Intragenic
ENSMUSG00000109560 UCSC
Rps8P22 chr9:57241354-57242075 + Intergenic
ENSMUSG00000066626 UCSC
Rps8P23 chr9:87921506-87921672 - Intergenic
ENSMUSG00000099584 UCSC
Rps8P41 chrX:127187945-127188612 + Intergenic
ENSMUSG00000082126 UCSC
Rps8P7 chr2:51493857-51494037 - Intergenic
N/A UCSC
Rps8P9 chr3:53184224-53184508 - Intergenic
N/A UCSC
Rps8P10 chr3:70473586-70473769 - Intergenic
N/A UCSC
Rps8P12 chr5:108910528-108911074 + Intragenic
Intragenic
N/A UCSC
Rps8P20 chr7:89410631-89411351 - Intragenic
N/A UCSC
Rps8P21 chr7:92828186-92828875 - Intergenic
N/A UCSC
Rps8P30 chr12:81149641-81150246 + Intragenic
Intragenic
N/A UCSC
Rps8P38 chr18:24177591-24177937 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_009098.2
GAAGGCGGGGCTGAGTTTTAGAAACCGGACCGTGAAGCTTTGCGCTTCCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACAACTGGCACAAGCGCCGCAAGACCGGGGGTAAGCGAAAACCCTACCACAAGAAGCGAAAGTATGAGCTGGGACGGCCCGCTGCCAACACGAAGATTGGCCCTCGCCGCATACACACAGTCCGAGTTCGAGGAGGCAATAAGAAGTACCGTGCCCTGAGATTGGATGTGGGGAACTTTTCCTGGGGCTCTGAGTGTTGTACTCGCAAAACAAGGATCATTGATGTTGTCTACAATGCATCCAACAACGAGCTTGTCCGCACCAAGACCCTGGTGAAGAACTGCATCGTGCTTATTGACAGCACGCCGTACCGACAGTGGTACGAGTCCCACTATGCACTGCCCCTGGGCCGCAAGAAGGGGGCCAAGCTGACTCCTGAGGAGGAagagattttaaacaaaaaacgatcaaagaaaattcaaaagaaatacgatgaaaggaaaaagaatgccaAAATCAGCAGCCTCCTGGAGGAGCAGTTCCAGCAGGGCAAGCTTCTAGCCTGTATTGCCTCACGACCAGGCCAGTGTGGCAGAGCAGACGGCTATGTGCTCGAAGGCAAGGAGCTGGAGTTCTATCTGCGGAAGATCAAAGCCCGGAAAGGCAAATGAGCCTCATGTGTAGTGTAATAAAGGTGTCTGCTGTTCTATCTG