Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sap18
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name Sin3-associated polypeptide 18
Also known as C530046K05Rik|D11Ertd539e|EMegR4|Sap18a|Sinbp1
Coordinate chr14:58035646-58042437
Strand +
Gene summary Predicted to enable transcription corepressor activity. Predicted to be involved in positive regulation of apoptotic process and regulation of RNA metabolic process. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in cytosol and nuclear speck. Predicted to be part of ASAP complex; nucleus; and transcription regulator complex. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system; dorsal root ganglion; genitourinary system; limb; and sensory organ. Orthologous to human SAP18 (Sin3A associated protein 18). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sap18

Retroname Coord Strand Genomic Region ENSG
Sap18P2 chr10:67628402-67628898 - Intergenic
ENSMUSG00000111956 UCSC
Sap18P3 chr11:53857808-53858376 - Intragenic
ENSMUSG00000080768 UCSC
Sap18P1 chr8:96551982-96552762 + Intergenic
ENSMUSG00000061104 UCSC

Expression

Transcript Sequences

>NM_009119.3
AAACCTCGTGCCTTTCCTCGCGAGAGACGACTAGCTCATGCTCGCCGCAGGGGTCGGAGGTCAGGGCGAGCGTCTCCCGGGCCGAAGGAGGAAGATGGCGGTGGAGTCGCGCGTTACCCAGGAGGAAATTAAGAAGGAGCCGGAGAAGCCGATCGACCGCGAGAAGACCTGCCCGCTCCTGCTGCGGGTCTTCACCACCAACAACGGCCGCCACCACCGAATGGACGAGTTCTCCCGCGGGAACGTGCCTTCGAGCGAGCTGCAGATCTACACCTGGATGGATGCAACCTTGAAAGAACTGACTAGTTTAGTGAAGGAAGTCTacccagaagccagaaagaaggGCACACACTTCAATTTTGCAATTGTTTTTATGGATCTTAAAAGACCTGGATATCGAGTTAAGGAGATTGGCAGCACCATGTCTGGCAGGAAGGGCACTGATGACTCCATGACCCTGCAGTCACAGAAGTTCCAAATAGGGGATTATCTGGACATAGCCATCACGCCTCCAAATCGGGCGCCGCCTTCGTCAGGGAGGATGAGACCCTACTGAAGTCTATTGACTTTCTTGAAGTTATTTTTCAGCCAGTTTGTAAAATAAACTTACTTAATCCTTTCTTCCCCCGGACTTTGCCATTAAGCCTTtaaattttcaacaaattgtaaCACATTTATTTAGGAATTAGAGTTGGATGTACTTTGGTATATTAAAGTCCATATGTTTTAAGCCCTTAtgtaaaatatgaagaaaagtgCTCTTAGCATTCTGTATAAAGCTGTATTGTGAAATACATGTGTTCAATCAGCCCAGGTGTAAAAGTTAATGGAGGCTTGAGTCTCACCTGATAATGTAGGGGTTTATTCAGCAGTAGAGGGCATTTTAAGCCCTAAAGAGGCAAAATAAGAAAGCCATGGGGTTGTATAAAGTGGTGAATATGTTTGTGGCATTAGATGATCGAAAAAGTAGGtggcaagggctggagagatggctcagaggttaagaacacttgttcttttctttttttttttttcccggagacagagtttctctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcctcgaactcaaaaatccgccaccacgcccggctaagaacacttgttcttgcagaggacccaggtctgtTCCCAATATCTGTATGATGGCTCACAGCTCCAGTCCTAAGGGATCTGACCCCCTTTTTGCCTCTGGGCACCAAGTGAAGGGAGGAAATGAATCCAAACTAGGCTATGAGGGAGGCTTACCTTGAGCCGAGAATGGAAATACAGCCTGTTGAGTGCTGGAGACCTCACTGGAGAACTATGAAAGCTAAACATTTGCAGTAGACTTTAGAGTAGTAGTTACAGAGTAAATGGGATGGCTGAGCCCGAAGTCATTGTTTCCTATTAGATGTGTAATGTGCATGCTGGCACATGCACCTGAAGGGAGGGCGAGTGAGAGGGAAAAGCTACTAAGTAGTTACTCTTTGATACGCATTTCTATTCCTAGCTTATGTGGGACAGCTGAGCCACACTGCTAAGCATGTCTCACAAAACCTGCACAACTGAGCTGCAGTGACTGATTCCTGTGGCTGCTAAAGGTGTGGCTGCTTGGTTAGCTCATGATGGGCATTAGGAACAACTGGCCCTGCTTTATTGAATTCTATACGATTGCAAACCCCAATCTTAATACATGACTATAGTTTCCACCACGAAGGTGGTTAAGAACAGCagagtgggggctggtgagatggctcagtgggtaagagcacccgattgctcttccgtaggtccagagttcaaatcccaagaaccacatggcagttcacaaccatccgcaacaagatctgactccctcttctggagtgtctgaagacagctacagtgtacttacatatattaataaaataaatcttaaaaaaaaaaaaacagcagagtGACTGCCTATCTGGTCTGTTGGCTTAAACACTTGCCAATGGCTATGATTTCCTAGAGTTGACAAGTAAATTTCTAAAAGTATTCTAGTAGGCTTAATCTTGACCAGGTAACCAGTCTCAGAACAAAAtcatgaattctttttttctcccaaagAAGGAAATTCCTAGGGCCAGTAAGCAAAAACCCAAGAATAATCAaagtaaaattacatttattttgggGGAAGGGGTGTGTGGAAGTCAGGACAAGTTTTAGAAGTTGGTTCTCTGGATCCACTATTGAGTCCCGAGGATGAAATTCAGGTTGTCATGCTTGATAGAGTAGACtccttcactgagccatctcagtggcccAGAGAGCATCTTTACATTCTGGGTTTTTCCGATTGTCACTTTATAagtttgcctgtgtatatgtgcactaTGTCTGTACAGACCTTTCAGAGGTCAGAAGCTGTCAGACCCCCGAACTAGCATTACAACTGGTTGTAAGTCTCTCTGTGGCTtcagggaactgaacttgagtccttggCATAAGCAACAAGTGCTCCCTGTAGCTCTTGTTTGTGAGACGGGGTCTCCCACTTTGTAGGCcatgctggcctagaattcagatTTCTGACCTGCCTTTGCTTTctatactgggattaaaggtatgtgtaaGATAAGACCACGTCCAGGCCAAAGAACAGTTTTAATATTAAACACTTAAAAAGTCACATTAATAAGAAGTCTTTACCCAGAAAAGGTGCTGTGGTGATAATGCagagccttttatttttttaagacagggtttctttgtgtagccttggccgtACTAGAATTCAAaatctgtagaccgggctggccttaaattcagagatctcctgcctcttgcctccctagtgctggtattaaaggtatgaACCAACCCCCCTTGCCCAGCTGCATAACATTCCAGTGTGGGAGTCAGTGGAATAGAGAACTTTGTGCACAGGGAGTTTTCAGTGAGCATTAACTGTTTCCAAAGTGGGACACAGCCTGTCCCTCTACTCTGCATCATAGGTTGGTTGTATAACCCTATTCTGCTTTCACTTCCAAGTAAACTTCATGTACAGTGACTTAAAGGGTTTTTCTGTACTGGAATTCCTGACCATCCTGTTGTTGGGCTTATAGGTCTGGTTGTACCCagctaaaataatttaaatgtgaaTGAGGTGAACTTTCAGAGGCTATCTCAGTTTGAGAAACTTGCAGTGTTCCTGATTCACTTGACTCAAGCTTTTCACCACTGACAGGTGCCAAGGACTTAAGTACAAAGATCAGACAAAGCCTCTCAAAAAATCAAGAGTAAGGATGAAAAGGATGTCGCGATGCTTATGACAAGTGTCAAGAAGAAGAGGATTGCTGAAACTACACGGTTCAGTTCTGGATATGGTGTGAGCTTGTCTGTCTCCAAAATGTGAGATGGCTATACCAGATAAAGGATTCAATAAACCTAAGAGGGACCAATGCCCACAA