Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Scp2
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name sterol carrier protein 2, liver
Also known as NSL-TP|SCP-2|SCP-X|SCPX|ns-LTP
Coordinate chr4:107901027-108002168
Strand -
Gene summary Predicted to enable several functions, including C-acyltransferase activity; cholesterol binding activity; and lipid transfer activity. Involved in regulation of phospholipid biosynthetic process. Acts upstream of or within peroxisome organization. Located in endoplasmic reticulum; mitochondrion; and peroxisome. Is expressed in several structures, including central nervous system; hair follicle; intestine; liver; and retina layer. Orthologous to human SCP2 (sterol carrier protein 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Scp2

Retroname Coord Strand Genomic Region ENSG
Scp2P2 chr9:123135663-123137051 - Intergenic
ENSMUSG00000111371 UCSC
Scp2P1 chr3:155220066-155224104 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_011327.4
TGCGGCCCCGCCCCCGACGCCTGGGGTTGGGATAATCGGACCCGACCCGGCTTTGGTTCTGCAAAGCCTCAGTCTGTAGGAGACCTTCGCTGCTGGAGCCATGCCTTCTGTCGCTTTGAAATCTCCGCGCCTGCGCCGGGTGTTCGTGGTCGGCGTTGGCATGACCAAGTTCATGAAGCCTGGAGGTGAGAACTCAAGAGACTATCCTGATATGGCAAAGGAAGCAGGCCAGAAGGCATTGGAAGATGCACAGATCCCTTACTCCGCAGTGGAACAGGCATGCGTTGgctatgtgtatggtgattccaccagtgggCAGAGGGCTATCTATCATAGTTTGGGACTGACTGGCATTCCTATAATTAATGTCAACAATAACTGTTCTACTGGTTCGACTGCTTTGTTTATGGCCCATCAACTGATTCAAGGAGgcttgGCAAATTGTGTGTTGGCTCTTGGGTTTGAGAAGATGGAGAGGGGATCCATTGGAACAAAAttcTCAGATCGGACCACTCCAACTGATAAACATATTGAAGTCTTGATCGATAAGTATGGATTGTCTGCACATCCGATTACTCCTCAGATGTTTGGGTATGCTGGGAAAGAACATATGGAAAAATATgGAACAAAAGTTGAACACTTTGCAAAAATTGGATGGAAAAATCATAAACACTCAGTTAATAACACGTATTCCCAGTTCCAAGATGAATACAGCTTAGAAGAAGTAATGAAATCAAAACCAGTTTTCGATTTTCTGACTATCTTGCAATGCTGCCCCACCTCAGATGGTGCCGCTGCCGCGATTCTGTCCAGCGAGGAGTTTGTGCAGCAGTACGGCCTGCAGTCCAAAGCGGTGGAGATTGTGGCCCAGGAGATGATGACTGACTTACCCAGTACGTTTGAAGAGAAAAGTATTATTAAAGTGGTTGGCTATGATATGAGTAAAGAAGCTGCCAGGAGATGCTATGAGAAGTCCGGCCTGACACCCAACGATGTCGACGTGATAGAGCTTCACGATTGCTTCTCTGTCAATGAACTCATCACTTACGAAGCACTGGGGCTCTGTCCAGAAGGACAAGGTGGAACCCTGGTGGACAGAGGGGACAACACTTACGGAGGAAAGTGGGTCATCAACCCTAGTGGAGGCCTCATCTCAAAGGGACACCCACTGGGCGCAACAGGTCTGGCTCAGTGCGCGGAGCTCTGCTGGCAGCTGAGAGGCGAAGCCGGAAAGAGGCAGGTTCCCGGGGCAAAGGTGGCTCTGCAGCACAATCTAGGCCTCGGAGGAGCTGTGGTTGTCACCCTCTACAGGATGGGTTTTCCCGAAGCTGCCAGCTCCTTCAGGACGCACCAGGTTTCAGCTGCTCCCACCAGCTCTGCAGGGGATGGATTCAAGGCAAACCTCGTCTTTAAGGAGATTGAGAAGAAGCTTGAAGAGGAAGGGGAACAGTTCGTGAAGAAAATCGGTGGCATTTTTGCCTTCAAAGTGAAAGATGGCCCTGGAGGCAAAGAAGCTACCTGGGTGGTGGATGTGAAGAATGGCAAAGGATCTGTGCTTCCCAATTCAGATAAGAAGGCTGACTGCACAATCACCATGGCCGACTCAGACTTGCTGGCTTTGATGACTGGAAAAATGAACCCTCAGTCGGCCTTCTTTCAAGGGAAACTGAAGATTGCTGGTAACATGGGACTGGCCATGAAACTACAGAACCTTCAGCTTCAGCCGGGCAAAGCTAAGCTGTGAGGAGTCCCTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACGTCTCGTCGTCAGGGCTTAGACTGACACCTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCTGCTTTGAGGACTTGCATTCTACTGTGCTTGATGAAGCTACTATGTCAATGATGGTTTGGGGTAAACTTGAGTTTCAGAATAAAATTCAGAACAGTAAAATCTGAAGACTGAGTAAACAAAGCCCTTGTTTTGCTTAGAAGTATATTTGAGGATCACTGTGTTGGACACTCGGTGTGACATTTCTCCTTGGGGGGACTAGAGAAGAAACAGATTTCCATAGTTGACCAGGAATTAGTGCCTCACACTCAATTACCTGCATCAGTTTCTCACTAAtagttcttaaaataaaattctgtactaaaagtttaaaaaaaaaactttaaaaatgttcattttatgCCATCAGAAACAGTTCTTTTCTTCCCAAATAAAATACAAGAATTATGGTCAGAGCTTAAGAGAGAATTTACAGCTGAACagaactgttttaaaatatttttcaaatgggcatctttttaaaaatcatagtaTCAGAGCCATGGATAccattaataaaaataactgaataaAGTTTTTTCCAGAGATACGGGCTTCAAATTATAGTTTCATATTAATAAGTGTATAAACTGAGTCTCACAAATTTCCTTTTTCATACACTTGATTGTCTGCATTTATCTTTCTTCCAAGTTTTTCTAATTCTAATGCTATTTGTTATAATTTAGGTTTGGGATAAAAATATGCTTTtggaagatttaaaaagaaaattaaaacagctCTTCCTGATTTCCTTGGC