Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sec61g
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SEC61, gamma subunit
Also known as -
Coordinate chr11:16451638-16458484
Strand -
Gene summary Predicted to enable protein transmembrane transporter activity. Predicted to be involved in posttranslational protein targeting to membrane, translocation. Predicted to be located in membrane. Predicted to be part of Ssh1 translocon complex. Is expressed in lung epithelium; ovary; and seminiferous cord. Orthologous to human SEC61G (SEC61 translocon subunit gamma). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sec61g

Retroname Coord Strand Genomic Region ENSG
Sec61gP5 chr4:120977909-120978242 - Intergenic
ENSMUSG00000082891 UCSC
Sec61gP1 chr1:60561812-60562245 - Intragenic
ENSMUSG00000081562 UCSC
Sec61gP13 chr14:106449190-106449412 - Intergenic
ENSMUSG00000115501 UCSC
Sec61gP4 chr2:85646329-85646554 - Intergenic
ENSMUSG00000083029 UCSC
Sec61gP6 chr5:138105143-138105404 + Intragenic
ENSMUSG00000106102 UCSC
Sec61gP18 chrX:88048989-88049409 + Intergenic
ENSMUSG00000084060 UCSC
Sec61gP3 chr2:153038616-153038943 - Intragenic
N/A UCSC
Sec61gP9 chr9:65507322-65507605 - Intergenic
N/A UCSC
Sec61gP12 chr10:89714111-89714435 + Intragenic
Intragenic
N/A UCSC
Sec61gP11 chr10:26842033-26842424 + Intergenic
ENSMUSG00000112804 UCSC
Sec61gP14 chr14:60391550-60391822 + Intergenic
ENSMUSG00000072068 UCSC
Sec61gP15 chr15:12765223-12765502 - Intergenic
ENSMUSG00000115119 UCSC
Sec61gP2 chr2:128448852-128449259 + Intergenic
ENSMUSG00000080789 UCSC
Sec61gP7 chr7:79061896-79062332 - Intragenic
ENSMUSG00000082400 UCSC
Sec61gP10 chr9:96466303-96466724 + Intragenic
ENSMUSG00000100522 UCSC
Sec61gP16 chrX:136986286-136986620 - Intragenic
Intragenic
ENSMUSG00000084118 UCSC
Sec61gP8 chr9:37164217-37164637 + Intragenic
ENSMUSG00000090136 UCSC
Sec61gP17 chrX:150893401-150893551 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001109971.1
TATTTGCATGCGCAGCGGGGAGACTCATAGCTGTAGCGCAGACACTCACTCACTAACTAACTAGCGACACTTCGTGGATTTACGTTGAGGCTGCTGGAGAGGCTGCTGGAGAGGCTGCGCCCGAGACCGGGAGGCGAACAATCGGGAACCAAGATCCCACACCGCCCGCCCGTTCAGCTGGAGAGACCCGAATCGCTCAGGTCGGCCTCTGCTCGGGAAGCCGGGAGAAACACACGTAGCACTGCGCCGGCGTAGTGACGTCTCTGCGTGAAGAGCCAATTGAAAGGAGGAATGGGCGGGCTGTGGGTTGCCAGCTTCCGGTTCCGTTGGGCTCGGTTCTCTCCTGAGCTACGTGTCTCTACGCTCTCAATCCGCCATCCAGTAAGTAAGGATTTTCTCATGAGTGacaAACATGGATCAGGTAATGCAGTTTGTGGAGCCCAGCCGGCAGTTTGTAAAGGACTCAATTCGGCTGGTtaaaagatgcaccaaacccgACAGAAAAGAATTCCAGAAGATTGCCATGGCTACAGCTATAGGATTTGCTATCATGGGATTCATTGGCTTCTTCGTGAAACTGATCCATATACCCATTAATAACATTATTGTGGGTGGCTGAGTCCTTCTCATCATGGGACGAGTGAGCCAGAGCGGGGGAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTGTggtgttttgtttcttcctccttcctatgAGGTTTTCTACTtctcaattaaaataatttcaaaataaacactttttCCATAACAGA
>NM_001109972.1
TATTTGCATGCGCAGCGGGGAGACTCATAGCTGTAGCGCAGACACTCACTCACTAACTAACTAGCGACACTTCGTGGATTTACGTTGAGGCTGCTGGAGAGGCTGCTGGAGAGGCTGCGCCCGAGACCGGGAGGCGAACAATCGGGAACCAAGATCCCACACCGCCCGCCCGTTCAGCTGGAGAGACCCGAATCGCTCAGGTCGGCCTCTGCTCGGGAAGCCGGGAGAAACACACGTAGCACTGCGCCGGCGTAGTGACGTCTCTGCGTGAAGAGCCAATTGAAAGGAGGAATGGGCGGGCTGTGGGTTGCCAGCTTCCGGTTCCGTTGGGCTCGGTTCTCTCCTGAGCTACGTGTCTCTACGCTCTCAATCCGCCATCCAGTAAacaAACATGGATCAGGTAATGCAGTTTGTGGAGCCCAGCCGGCAGTTTGTAAAGGACTCAATTCGGCTGGTtaaaagatgcaccaaacccgACAGAAAAGAATTCCAGAAGATTGCCATGGCTACAGCTATAGGATTTGCTATCATGGGATTCATTGGCTTCTTCGTGAAACTGATCCATATACCCATTAATAACATTATTGTGGGTGGCTGAGTCCTTCTCATCATGGGACGAGTGAGCCAGAGCGGGGGAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTGTggtgttttgtttcttcctccttcctatgAGGTTTTCTACTtctcaattaaaataatttcaaaataaacactttttCCATAACAGA
>NM_011343.3
TATTTGCATGCGCAGCGGGGAGACTCATAGCTGTAGCGCAGACACTCACTCACTAACTAACTAGCGACACTTCGTGGATTTACGTTGAGGCTGCTGGAGAGGCTGCTGGAGAGGCTGCGCCCGAGACCGGGAGGCGAACAATCGGGAACCAAGATCCCACACCGCCCGCCCGTTCAGCTGGAGAGACCCGAATCGCTCAGGTCGGCCTCTGCTCGGGAAGCCGGGAGAAACACACGTAGCACTGCGCCGGCGTAGTGACGTCTCTGCGTGAAGAGCCAATTGAAAGGAGGAATGGGCGGGCTGTGGGTTGCCAGCTTCCGGTTCCGTTGGGCTCGGTTCTCTCCTGAGCTACGTGTCTCTACGCTCTCAATCCGCCATCCAacaAACATGGATCAGGTAATGCAGTTTGTGGAGCCCAGCCGGCAGTTTGTAAAGGACTCAATTCGGCTGGTtaaaagatgcaccaaacccgACAGAAAAGAATTCCAGAAGATTGCCATGGCTACAGCTATAGGATTTGCTATCATGGGATTCATTGGCTTCTTCGTGAAACTGATCCATATACCCATTAATAACATTATTGTGGGTGGCTGAGTCCTTCTCATCATGGGACGAGTGAGCCAGAGCGGGGGAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTGTggtgttttgtttcttcctccttcctatgAGGTTTTCTACTtctcaattaaaataatttcaaaataaacactttttCCATAACAGA