Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tra2b
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name transformer 2 beta
Also known as 5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta
Coordinate chr16:22063302-22084755
Strand -
Gene summary Enables poly-purine tract binding activity and pre-mRNA binding activity. Acts upstream of or within cerebral cortex regionalization; embryonic brain development; and regulation of mRNA splicing, via spliceosome. Located in nuclear inner membrane. Is expressed in central nervous system; extraembryonic ectoderm; olfactory epithelium; retina; and thymus. Orthologous to human TRA2B (transformer 2 beta homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tra2b

Retroname Coord Strand Genomic Region ENSG
Tra2bP5 chr11:4078394-4080066 - Intergenic
ENSMUSG00000083838 UCSC
Tra2bP2 chr3:54717411-54718824 - Intergenic
ENSMUSG00000069011 UCSC
Tra2bP1 chr3:150219928-150221861 - Intergenic
ENSMUSG00000105779 UCSC
Tra2bP4 chr8:62992678-62994478 + Intergenic
ENSMUSG00000109895 UCSC
Tra2bP6 chrX:55199903-55201903 - Intergenic
ENSMUSG00000082253 UCSC
Tra2bP3 chr5:46540129-46540759 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_009186.5
GGGAGGGGCCAGGAAAGCGCGCCttcgggggagtgggtgggaccAGGTTAAAGAGCGTGGCGTCACATCCGGCAGTGTTAGACCGGTGCGGAGGTGGTGCGGAGCGTGTCGGCTTCGAGCTCCTCGCAAAAGTGTGGCGTCGCGCTAGGCTGCGGCGGAGCCTCTGTAAGGAAGGCGGGAGCTTGACAGCTTCAGGAAAGGCCCGTAGCGGTGACAGCGACCCGGAGTCATGAGCGACAGCGGCGAGCAGAACTACGGCGAGCGGGAATCCCGTTCTGCTTCCCGAAGTGGAAGTGCTCACGGATCGGGGAAATCTGCACGGCATACACCTGCAAGGTCTCGCTCCAAGGAAGACTCAAGGCGTTCTAGATCAAAGTCCAGGTCCAGGTCTGAATCTAGGTCTAGATCCAGAAGAAGTTCTAGAAGGCATTATACAAGGTCACGATCACGATCTCGCTCGCATAGACGATCCCGGAGCAGGTCTTACAGCCGAGATTATCGCAGgcgccacagccacagccattcTCCCATGTCTACTCGAAGGCGTCATGTTGGGAACCGGGCAAATCCTGACCCCAACTGTTGTCTTGGCGTGTTTGGGTTGAGCTTATACACCACAGAAAGAGACCTAAGAGAAGTGTTCTCTAAATATGGCCCCATTGCTGATGTGTCTATTGTATATGACCAGCAATCTAGACGTTCAAGAGGATTtgcctttgtatattttgaaaatgtagACGATGCCAAGGAAgctAAAGAACGTGCCAATGGAATGGAGCTTGATGGGCGTCGAATTAGAGTCGATTTCTCTATAACAAAAAGGCCCCATACCCCAACACCAGGAATTTATATGGGGAGACCCACTTATGGCAGTTCTCGCCGCCGAGACTATTATGACAGAGGGTACGATCGGGGTTATGATGACCGGGACTATTACAGCAGATCATACAGaggaggaggtggtggaggaggtggatGGAGAGCAGCTCAAGACAGGGATCAGATTTACAGAAGACGGTCACCTTCTCCTTACTACAGTCGTGGAGGATACAGGTCACGTTCTCGATCACGATCCTACTCACCTCgtCGCTACTAAAGCATGAAGTTGAAGACTTTCTGAAACCTGCCATAGAGCTGGGATATTGTTTGTGGACAATATTTTCTATTGTCTCCTGTTTAAAAAGTGAACAGTGCCTAGTGAAGTTAGGTGACTTTTACACCTTTTATGATGACTACTTTTGGTGGAGTTGAAATGCTGTTTTCATTCTGCATTTGTGTAGTTCGGTGCTTTGTTCAAAGTTAAGTGTTTTCAGAAAAGTATgttttgcatgtatttttttacagtccaaatTTTGACTGCTGAGAAGTTTCTATTGTAAAAAACTTCATTTAAAAGGTTTTTCTACTGAATCCAGGGTATTCTGAAGATCGAAGCCTGTGTGTAAAATgctaccagatggcaaaaagcaacaataaacaagtttgatttttacttttctttctaaatatcaaTGCTTAACCAGAACCATTCTTAAGTTATcagtaaaaaagtaaaaagttaaataaatgtcTTTCAGGAGTCCATGAAACTTGCCATATTCAATATACCTGCGATTAAGTGTTAAAAAATACGCTGTAACTCTGTACTGCTAGTATTAGAACAAAACTCTTCCCATACAGCAAATGCTTAATGCTTACATTAATGTGGATGTGTCGGCCTTTATGTAATCTGTATTATATATAGCAGGGAATAAGAGCTACAGATACATGCCTTTAAAGGGCTGTTTCTTAAGGCTGTTACAAGGAGATAATGGTATTTCAACTAATTATCAGCAAGTGACAATACATTCCACCACAGATGGACTCTTGTTCTTCTAGCGTTTAGACTATATGAAAATACTGGGTGCTTCAAAGTATGGAAGGAGCGAAGGGATCATCAAACCTTGTCATGGATGAAGACTGcctgttcattttttaaatatgattttcaggtcctttgcttACCAAAGGAGGCCCAATTCACTCAAATGTTTTGAGAACTGTTTAAATAAAGGCAAGAAAAATTGCTGATGCAACTTGTTTTTACAAAGaagtgttggttttctttttaactgtTGTAATTAAAGTCCTGTAGTTTATTTAGTGACTGATGCAATATTGTTCTTGCTTCAAGATAACATTAAATCTATTTCTCAAATATATTGGCCAAGTAGAACTGGAATGAATGTTTCTCTTTGGTGCGAGGTTGTATTAAATAACCTCCCAACATGTCTGGGTATTTTGCAAAGCATGTTTTTAGTACAAATCTGCTTCTGTTTAAGGCTGTTAAAATGTAGGACTTACTAAGGGGCTTTTAGCACTTTGTTGTTACTTAGTATATACAGGTGTTCCATAAGTGCTacatattattatagtatccactTGCAGAGGCAGTTTGGCTTAGATTAATTTGATATCTAAAAGCTTCAAGAATTTCAGAACTACAGCCCCAGCACTGAGCTTGAGTTTATGGTACTAGGGCAGGGAACACAGTGCTACCTAGAACAGTCTTGTTAAATAAAACTTGCATTGTACTGTGGGAATATCTGGAAATCCCCCTTATAAATCTCATTGAACTAATGAGGGGCTCTAGTTTGGGGGCGGCAGGGGGGTTAGAGGGAATAGTAGGGCTAAGTGTGGGTTTTCCGGACTGCCATTGGAGCTAAGGATCACAAGTGTCTTTCTGGACAGCCAAACTTACAGTAAATGTATCCCAGAAAAAGAGCACACTGATGTTTTTGATAACTAGGTTTCATTTAGACCATTTTTGTGAGGTAGCTTTTCacttccactgtatggtttctTGTTACCTCCAGGATGCATTAGGAGGAAAAACCATTGTTGCCTATAATGAATGTGCTTGGGCATCAGGttagttttaaatgtaaaataacaGTTTGAATTAGATTTCCAATTGGGCATTGATGAGATACTGTTGTTGAAATTCTAAGTCACAGTTTAAATCTAGGTTTTCTTAGCTACACAATAAAGGGTAGTGAATGCCATGAACTTGTGCATGTTTACAGATAGGAGTCTGCAAGCCTCAGAAGCCCTGGATCTCCTGAACTGAGCTTTGTAGATTTTGTTAACCACCATGTGAAGTTTGAAAGTCAAACCTGAGTCTTTCAAGAGCAACAAGTTCTCAACAAGGTATAGAATGAGAGAAGAGATCACACCTGTGTCATGAACAAAGCCTGCTGCTCATTCTGTAAATATgattttcaggtcctttgcttACCAAGGAGGCCCAGCTCACTCTTAATGTTTTGAGAACTCTTTAAACATTCTCAGGTCCAacaaaactaataataaaaatgtagatGCAGGGCATGCAATGAATAAAATACTACAGTTTTAAGTA