Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Vps4b
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name vacuolar protein sorting 4B
Also known as 8030489C12Rik|Skd1
Coordinate chr1:106698518-106724455
Strand -
Gene summary Predicted to enable ATP hydrolysis activity; protein C-terminus binding activity; and protein homodimerization activity. Involved in late endosomal microautophagy; multivesicular body assembly; and viral budding from plasma membrane. Acts upstream of or within cholesterol transport; endosome organization; and potassium ion transport. Located in cytosol. Orthologous to human VPS4B (vacuolar protein sorting 4 homolog B). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vps4b

Retroname Coord Strand Genomic Region ENSG
Vps4bP1 chr14:3924330-3927139 + Intergenic
ENSMUSG00000114529 UCSC

Expression

Transcript Sequences

>NM_009190.2
CTGGGTGACTGGTTAGCGCGTGTGCGGATGACGAAGCGGAAGTGCCCGGGCCAGAGGCGGGACCAGAGCCCTAAGGGGCTCGAAATTACGGAAGTTTTGTGCGGAGGGTCGGGTGGCTGCTGGAGTTCCTGCTGGATTTACGGCTCCGGAGCTGGGGCTGCCGCTGGGGGGGTCTCAGAGCCGCCAGCCTCCGCACGGTTTGCGGTGGTGACCCGGGCGCGACTCGACGGCGCTGCTGCGGGCCTTGTCTGTAGTAGGGGACCCCTCGGATCTCCACCATGGCGTCCACGAACACCAACCTGCAGAAAGCAATAGATCTTGCAAGCAAAGCAGCCCAGGAAGACAAAGCTGGGAACTATGAGGAAGCTCTTCAACTCTACCAACATGCTGTGCAGTATTTTCTCCATGTTGTTAAATATGAAGCACAAGGTGATAAAGCCAAGCAAAGTATCAGGGCCAAGTGTACAGAATATCTCGATAGAGCAGAAAAACTAAAGGAATAtctgaagaaaaaggagaagaaaccaCAGAAGCCTGTGAAAGAGGAACAGTCAGGCCCAGTTGATGAGAAGGGgAATGACAGTGATGGGGAAGCAGAATCTGATGATcctgaaaaaaagaaactgcagaaTCAACTTCAAGGTGCCATTGTTATAGAGCGACCAAATGTGAAGTGGAGTGATGTTGCTGGTCTCGAAGGAGCCaaagaagctcttaaagaggctGTGATTCTGCCTATTAAGTTTCCTCATCTGTTTACAGGAAAGCGGACACCTTGGAGAGGAATCCTATTATTTGGACCACCAGGAACAGGAAAATCTTATTTGGCTAAAGCTGTTGCAACGGAAGCAAACAACTCAACATTTTTCTCAATATCTTCCTCTGACCTTGTGTCTAAGTGGCTGGGGGAAAGCGAAAAACTGGTTAAGAACTTATTCCAGCTTGCCAGAGAGAACAAGCCTTCTATCATCTTCATCGATGAGATTGATTCTCTGTGTGGTTCCAGAAGTGAGAATGAGAGCGAGGCTGCACGGAGAATTAAGACGGAGTTCCTGGTTCAAATGCAAGGAGTTGGTGTGGACAATGATGGCATTTTGGTTCTGGGAGCTACAAATATACCCTGGGTTCTGGATTCTGCAATTAGGCGAAGatttgagAAACGTATTTATATTCCTTTGCCCGAAGCCCATGCCCGAGCAGCCATGTTTAGACTGCACTTGGGCAGCACTCAGAACAGCCTCACAGAAGCAGACTTCCAAGAACTTGGGAGGAAGACGGATGGCTATTCAGGAGCAGATATAAGTATCATTGTACGGGATGCACTTATGCAGCCTGTGAGAAAAGTTCAGTCAGCTACTCACTTCAAAAAGGTTCGAGGACCCTCAAGAGCTGATCCTAACTGCATTGTAAATGACCTGCTGACACCCTGCTCTCCGGGAGACCCTGGGGCTATTGAAATGACATGGATGGATGTTCCTGGAGATAAACTCTTGGAGCCAGTTGTTTCCATGTGGGATATGCTGCGGTCCCTGTCCAGCACAAAGCCAACAGTCAATGAGCAGGACTTGTTGAAGCTGAAGAAGTTTACAGAAGATTTTGGCCAGGAAGGCTAACacaaagacagcaagaacatGTTTATGCtgcatttcttctcttttgtaGGTATTTTGCCTTTCTTGGATGACATTCAGATTATTTCCAGCAAAACTCGTTTACCCAGGGAAACATACATGTCACTTGAGTGTTCCTAAAGTCTGTGTTGTCCTTTTCCTTCACTGTCTGTTAAATTCTCTAATTCACAAACATTGTCGAATTGTAAGGAAAGCAACAATGGTATGAGGAACAGCAGAGTGGGGACATCGAGGAGCCTCGCCCGGCTTCATGGACAGCAGCTAGGATTCTCATGAGTACTTGTTCAAAGAGCAaggccttttttcttttcctaaaaatgaaattgaaacgGGGCTAAAGCTAATGGTATATAAATGTCTTGAAAAATCTTTAAGCATTTTATCAATGTAAACTTACtgctttattaaaaattaatggtAGAATCTTTACTCTCAGGGATGGGCAGCAAAACGCAGAGCACTGATGAATTTGGGGTTTGTGGCACAGCCAGTGCTCCTGTTGAGTTTCTAGTGGGCTGGTTTCTCCTGTATAGATTAAAGTGATTCCTTTAAAGCAGTGGGCTTTTATAACTCCAtgactccttccactgtgcactCGAGACTTTCTAAATCAGTAGTCATCTTTGCCTTGTCTACGCAGTGTCTTTTATAGCCAAGATTGACCAAAAGAGGTAGCAAACAAGTATGCATTTTTCGAGAATTGTCATGAAATACTGTAATGGGAAACTTTAATAAGAAAATGACTTTCTTCTGGACTTTGGGATGTTTCCTGTGGAtgatgtgggtatgtgtgtacatatatatacataatttttaaaatattagcgAGAGTCATGTCTTTCACTTTTAAGTTCAGGGAGCAGTTTGTTCTAACCACACAAACATTCTCAGTGTGGTATTTCATGGAGCTTTAGAGACAAACTAATGTCTCATTACATAATGAAATATGAACATACCATCGTGTTATTTCAATGTCTTCAAATACATGATCTGAGGGTGTATGTCACATACTTGTGTACCAACTCTTAGTTGTGCCTTGGACATTTGCATTGCCTACCTGCAAACAATTACTAGGTTAACTAGAATTGCTATGCAGTTCTACCTTGCGAGTGCTACACGGTAATtgcattttaaagtatatttgcaCATTTTACATGCTATGCTATATGATTGCCTTTGGGTTTTGTGTACAGACTATTTTTGTTGATATTCAATGAAAATTATAGGCTTGAAATAATACTGTTCCTATGTGAAGTAAATTGCTATAACCTACTTTtggcttttatatgttttttttttttttattttggaaccTTCTACATAGGAGAAAATGTCTTAAGTTGGttagataaaaagaaataatttatatttattaatgagCATATATGAAAGATTCAAGGGTAgaagtgcacacctataatctcaggacTTCAAAGCTAGTCTAGTTTCCATAACAAGacactgttttttaaaagaacattaaaattCTGCTCTTCCACAGCTACTGTGTGAAAGCTGTAAGTTATATTGGCAGAATAATACTGAATTTTTTCTAAATGAATTAATTTGTGTAGCATCTTAGTTGTTGAATTAGATTTTAATTAATAGATCCTACTTCCAGCCTCAGTGCTTAACATTCcc