Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sms
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name spermine synthase
Also known as Gy|SPMSY|SpmST|gyro
Coordinate chrX:156226847-156275283
Strand -
Gene summary Predicted to enable spermine synthase activity. Acts upstream of or within spermine metabolic process. Is expressed in several structures, including central nervous system; ganglia; limb; respiratory system; and tooth. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability Snyder type. Orthologous to human SMS (spermine synthase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sms

Retroname Coord Strand Genomic Region ENSG
SmsP5 chr10:31085205-31089162 + Intergenic
ENSMUSG00000111396 UCSC
SmsP7 chr13:14016827-14019319 + Intergenic
ENSMUSG00000113493 UCSC
SmsP2 chr3:58559472-58561465 + Intergenic
ENSMUSG00000105021 UCSC
SmsP3 chr3:68753317-68755228 + Intergenic
ENSMUSG00000103218 UCSC
SmsP4 chr6:72049557-72051193 - Intergenic
ENSMUSG00000108344 UCSC
SmsP9 chrX:61818733-61820348 - Intergenic
ENSMUSG00000081752 UCSC
SmsP8 chrX:104184361-104186055 + Intragenic
ENSMUSG00000082245 UCSC
SmsP1 chr2:77490196-77491876 - Intragenic
Intragenic
N/A UCSC
SmsP6 chr12:48232927-48233593 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_009214.4
CGAATGGCGGGAGAGCATGGCCAGAGCTTTAGCGCAGGGCGCGGCCATTGGTGACGCATGCCAGGGAGCCCGGCGCCCGCGATTCCACCATTAGCGAGGCCTCACACCCAGCGCTTCAAGTTCGGGGCTGGAGGCGTCCCTGCTTCCTCCTCTAAGAGGCGGGTCGGCCCCGCCCCCGCGCCCCGGGTCGCTTGCCCGCGGCCCCTCCCACCTCCTAACTCCTGGCCTCCCCCGGCGCAGCGCACTCCCCGCCGGCCCGCAGCCTGACACGCCGCGCGGTCCCTCAGTCTCCTGCGGTCGCCTCCCCAGGCATGGCACAGGGCCTCGCCACACTATGGCAGCAGCAAGACACAGCACGCTCGACTTCAAGCTCGGCGCCAAAGCTGATGGTGAGGCCATTCTGAAAGGCCTTCAGTCCATTTTTCAGGAGCAGGGGATGACAGAGTCAGTGCACACCTGGCAGGACCATGGATATTTAGCAACTTACACGAACAAGAATGGCAGCTTTGCCAATTTGCGAATTTATCCACATGGATTGGTGTTGCTGGACCTTCAGAGTTACGACAGTGATGTGCAAGGCAAACAAGAAACTGACAgccttttgaacaaaatagaagaaaaaatgaaagaattgaGTCAAGACAGTACTGGGCGGGTGAAGCGATTACCACCCATAGTTCGCGGAGGGGCCATTGACAGATACTGGCCTACTGCTGATGGGCGCCTGGTTGAGTATGACATAGATGAAGTGGTGTATGATGAAGATTCACCATATCAGAACATCAAAATCCTACACTCGAAGCAGTTTGGGAATATTCTCATCCTCAGCGGGGATGTTAATTTGGCAGAGAGTGACTTGGCATATACCCGTGCCATCATGGGCAGTGGTAAAGAAGACTACACTGGCAAAGATGTACTGATTCTGGGAGGCGGCGATGGAGGCATATTGTGTGAAATTGTCAAACTGAAACCAAAGATGGTCACTATGGTAGAGATTGACCAAATGGTAATTGATGGATGTAAGAAATACATGCGGAGAACATGTGGAGATGTCTTAGACAATCTTAGAGGAGACTGCTATCAGGTTCTTATAGAAGACTGTATCCCAGTACTGAAGATGTACGCCAAAGAAGGGAGAGAGTTTGATTATGTGATTAATGATTTGACAGCTGTCCCTATCTCTACATCTCCAGAAGAAGATTCCACATGGGATTTCCTCAGACTGATTCTCGACCTGTCAATGAAGGTTCTGAAACAGGATGGAAAATACTTCACACAGgggaactgtgtcaacttgactgaaGCCCTGTCGCTCTATGAAGAACAGCTGGGGCGTCTGTATTGTCCTGTggaattctcaaaagagattGTCTGTGTCCCTTCATACTTGGAATTGTGGGTGTTTTACACTGTTTGGAAGAAAGCTAAGCCTTAAAGATGAGAATGACGTGTGCTGCGAGCCACCTTCCTGACCTCCATATGCCGTATATGCCATCAAATGTGTCAGGCAACTGCTCATGAATTCCTTCTAGTGGTTTtcacttttaattattatttttaatttaaaaaagccaatgggaaaaatgtatattttgatgAGTTAggatgttaattttaaaaagtcagccGAAGGACAATTAGACAGCCCAGCAAAGACTGCAGAATGCACTGACCCCCTAGAATgtgattttagtatttttttttctctgtgtggggTTTGGGTTTTCATTTTGGTTTCAGTAGACCTTTAATTTGGACATGTGGAGGAATGAACATCATTGTTTTGTTCTGGAGAGAAGTTCCTGATAGTGTTTCTCCCCTCTCACCCCCAAATTGACTTAGATATTAAAATTTGGTGcttttaaaggttttaaaagaGTGATTAGCAGTGCTTCAATTAAAATGACAAAGGAGACCTCTTACGGTGTTTGTCCCTTTATTtcagcctctcttcctctttcttaccTCTGATGGCCTAGGGCAAAGGTGTATTCTATCTAGACTGTTAACTGCACTCAGCATAATGTCAAGGCCTTGAGGAACGATCCACAACCTATTATATTTGCCGCCCCCCCATTATAAAGTTGTTCCAAGGATAGCAGAAGATTTTTGCCTGCCTGAAAAGGGTGAAAGTCAAAGATGATTTCTGTTACTGCTCTCCCTGATTAGAGATCCAAAGGCCTTTGAGAAGACTGTAGGATGTGCAAGTGCACACTAGAGTTCATGTAGTCCTGTGGCAAAATAACTTAACTCTTAAGAAAGTGCATGTGAATAGCAACTTGGCATTGTATTGTGGATAATTTGAATTGTCTATCCTATTGTTTGTGTAAAATATTTACACTGTATCAGTagaatggtatttttttttacagcaagTAAAACATTGAAAATTTACTAATGGAAATCAGGCTCAAGTTTCATTGTCCCTCCCAAGATAGGAAGGAACAAATAAGACAGGACAAGACAAATGATCTTTAAAAGTGAGCGCAAACCTATGCCATTTGTTTTAGAttgacatggaagaagaaacaatagagAATAAAAGGAGTTGATAGTTATGTTCAAATTAGATGCATTTAACAATATTTTTGGTGCATGCATAGGGTAAAAACAGCCCAGTAGACACTTCTCCACCCAAATTCTTCCCCAGTGCTTTGAAAACTTTGTATATTGTGGAGAATTGAAAACAAATGTACTGCTACAGTTAGAATATTAGCTAAGGCCAATTGCCCCTTACCCACTGTACTGTTATTCTTACGATTACTTTTGAAACAGTGACTGTATGTATGTAGCCCAGTCTAACCTGGAGCttattatgtagcctaggctttcCTGGAAGCTCACAAGAATTGAGCTTGTACCATCACACAGCTTAATTCTTGTTACCATTTAAGTAAAGAAAGCAAGTATATCAGCTGCTGGGGTAATATTAATGAGGGGACTGACCTGCGTGATCCGTGAAGAGTAACTTGAGGCCATAACCACAGATCCACTCATAATTCGGGTGACTCAGTTCCTGCTAAGCACCAGGTGGTAGAAATGAAGAGGATAAGGTTATGTGAGGCTAATTGGTTATGAGATGCATTTGGGATAAAATGAAGGAAGTGGTGttgaggaaaggaggaagaaagaggtttTTATCTTGAGTGATAAATGTGAACTCAGATGTGACTgatttgctgaaggagggtcTCCGTTTTGAGCCCTTGTTATTTTGACACCGAAGCATGCAAACTGAACCAACACCCACCCTACCCTGTGCTCTACTCCGACCCACCTTCGCTTTGGCTGCCTCTTAAGGAATGCTAATggatttgttgtttttcttaataCTGTAGTGTTATGTAGTGTGAAAGATTCTTTTAACAGTGGAATATATTATGGtgtcctgctttttttttaatgaaagacaaaacaaatatgGATAGAGTTTAAATTCTGTTCAACACAGCAGATACTAAGAATTGATTTATTAAGACATGAAATGCTGCTTTCTCTTGGAAATGTGATTGAATATTTATAAAAGAGCTCCACCTGGGCCGGGGAAGGCTGGGTTGGTGGTGGTTTTAGTGGGCTAGAACATTACTATCTGAATAAACAAATGTGCTGCTTCTTCCTGTAGACTTGGAATAGTCATGTCCTTGCTTTCCCTAACAATTGCTGACACAAGACTTTGTATTTCTGCCTGTCATCTGTCTCTCAATAAATGGATCAATTTCAT