Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snapin
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SNAP-associated protein
Also known as 25kDa|Bloc1s7|Snap25bp|Snapap
Coordinate chr3:90395333-90398320
Strand -
Gene summary Predicted to enable SNARE binding activity. Involved in anterograde synaptic vesicle transport; negative regulation of neuron projection development; and regulation of synaptic vesicle exocytosis. Acts upstream of or within several processes, including lysosomal lumen acidification; terminal button organization; and vesicle organization. Located in acrosomal vesicle; cytosol; and manchette. Part of BLOC-1 complex. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and immune system. Orthologous to human SNAPIN (SNAP associated protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snapin

Retroname Coord Strand Genomic Region ENSG
SnapinP2 chr14:22823966-22825489 - Intragenic
ENSMUSG00000114967 UCSC
SnapinP1 chr8:82516373-82517439 - Intragenic
Intragenic
ENSMUSG00000090584 UCSC

Expression

Transcript Sequences

>NM_133854.3
GACCCTCGCGGCAGGCTGAGGGCGTCAGGGCAGTTCGCGATGGCCGCGGCTGGTTCCGCTGCTGTGTCAGGGGCCGGGACCCCAGTGGCGGGGCCCACAGGCCGCGACCTCTTTGCCGAGGGGCTCCTGGAGTTCCTGCGACCCGCGGTGCAGCAGCTCGACTCTCACGTGCACGCGGTCAGAGAAAGCCAAGTAGAGCTCCGGGAACAAATTGACAACCTAGCTACAGaactGTGCCGGATCAATGAGGATCAGAAAGTGGCCCTGGATCTGGACCCCTATGTTAAGAAGCTGCTTAATGCCAGGCGACGAGTTGTCTTGGTCAACAATATTTTACAGAATGCAcagGAACGACTAAGGCGGTTAAACCACAGCGTGGCCAAGGAAACAGCTCGCAGGAGAGCTATGCTGGATTCAGGAGTTTACCCTCCTGGTTCTCCAAGCAAATAAGCACGGGCCCGTGACCTGAGTATACAAGTACAATTCTCCAACGGCTTTGTCTGGTAGACACGAGAAGATTCCAGGAAAGTCTCTGTAGacctttgattttttttgcaCTATGTACTCATTCATGTAGCCGCCTCAAGAAACATGCGTACGGCAGGACTATTTCCTAAAGAACCTCCATCACAGCTTGTCCATCCAAGAAAGAGCCTCTACCTTTTGGGTTTTGTTAatcttgagacaagatctcagtaTGTAGtcccggctggcctcaaacatgtcctcttgccttagcctcctgaatgctgggattataataGGCATGTGTCAGAGTGCCGGGCTCAAGCCTCTATATATTTCCCCCAAAGAATACTAAGTAAATTAGGCATCGTGTGGTAGAAAATTGAGAAAACACCAGATTTAGTGAGAAAGTATACTCCTATTTCTCCCCCTCTGCTTCACCACAGTTCCTCTCAGAAGGTAATAACCTTTCCAGGATCATCTTACACTCTATAATGTTTAGGTTAACTCCTATTAACAAGTTTCGCAACTGTTGCCTTCATTGCTACCCAAGGAGAGCATGCCAGATAGCGAGGATCCAAGGTCAAGGCAGAGCCTTGACAGCTAAGAGTCCTAAGCTTttgcgatttttttttttgtttagacTACATATTTTaagggctagagggatggctcaatggttaagaacactggtgaTTCTTCCAGATGGCGTCCAGTGCTTAGcgcccacatggtgactcacagcagcctctaactccagctccaggggaacccAATGCCCTTGTCTGGCCTTTtggcccagcacacacacacatatgatgcagatatatatgcaggcaaaacaaccatcctcataaaataaaatttaaaagttacataTTTAAGCGCCATCCTTTCCAGGCTTAGCCAGCCAGTGTTAACCATCCTGTTACTCCTATTACTGGGGCTGGGCAGTTTCCTTTACCTGTAACTCCACTTTGTTTACAACTGAGGACTTAGGTAAAGTCAAGGTAAATAATTTATCCTCTTGGCCACCCTGGCTTGACTATGTTAATATTAAGTATTGCTCAACATTATTAAATAAATGCTTGTACTGGTTATTTTaacaaaaaaatttattttattatggttTCAAAGGGTTCAGGACATGGTCACACTGATGCATATTTTGGGGCCTATTTTGAGACATGAGAATGTGAGGTGATCAAGCTTCCAAGAGAAGGGAATGCTGGACTCTGCCATTTATCCCTTTATTCTGTCCATGCACTGAGCTCATAAGATGCTTTCACCCCACATTTAGGGTTAATCCTTTGCAGAAATTTCAGGTTATTTTAGGCCAAGCTGAAGAAATTAGCCATCACAATGGTATCCTAGGAATCTATTACTTtcaatttatataatttaaaacagcaaTCTCAATGTTTATAATAAAAGACTCAACTTGAATTCTA