Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snrpb
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name small nuclear ribonucleoprotein B
Also known as SM-B|SM11|SMB|SNRNP-B
Coordinate chr2:130013556-130031184
Strand -
Gene summary Enables histone pre-mRNA DCP binding activity. Predicted to be involved in spliceosomal snRNP assembly. Predicted to act upstream of or within protein methylation. Located in cytoplasm and nucleus. Part of histone pre-mRNA 3'end processing complex. Is expressed in several structures, including branchial arch; central nervous system; limb; maxillary process; and sensory organ. Human ortholog(s) of this gene implicated in cerebrocostomandibular syndrome and mixed connective tissue disease. Orthologous to human SNRPB (small nuclear ribonucleoprotein polypeptides B and B1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpb

Retroname Coord Strand Genomic Region ENSG
SnrpbP1 chr7:61587999-61588697 + Intragenic
ENSMUSG00000109178 UCSC
SnrpbP2 chrX:49033444-49034460 + Intergenic
ENSMUSG00000083399 UCSC

Expression

Transcript Sequences

>NM_009225.2
TAGCGGCGGCATTTTGCAGGCAGCATTTCCGTTAGCGGCGGCGGCGGGAATCCAGCGGCTGGCTGGCTGGCGACTAGGCCTCTGTGGCAGAGAATCCGGCGGGAATCTGAGCCATCCGAGCCGCCACCATGACGGTGGGCAAGAGCAGCAAGATGCTGCAGCACATTGACTACAGGATGAGGTGCATCCTGCAGGACGGCCGCATCTTCATCGGGACCTTCAAAGCCTTTGACAAGCACATGAACTTGATCCTGTGTGACTGTGATGAGTTCAGGAAGATCAAGCCAAAGAACTCCAAACaagcagaaagggaagagaagcgAGTCCTTGGTCTGGTGTTGCTTCGAGGGGAGAACCTGGTCTCCATGACAGTAGAAGGACctcctcccaaagatacTGGCATTGCCCGAGTGCCACTTGCTGGAGCTGCTGGGGGGCCAGGCATCGGCAGGGCTGCTGGCAGAGGAATCCCGGCTGGTGTTCCTATGCCCCAGGCTCCTGCAGGACTTGCTGGGCCAGTCCGAGGTGTTGGAGGGCCATCCCAACAGGTGATGACCCCACAAGGAAGAGGCACTGTTGCAGCTGCTGCCGCTGCAGCCACAGCCAGTATTGCAGGAGCCCCAACTCAGTACCCACCTGGTCGTGGGGGTCCTCCTCCACCTATGGGCCGAGGAGCCCCTCCTCCAGgtatGATGGGCCCACCTCCTGGCATGCGGCCTCCCATGGGTCCCCCAATGGGGCTCCCTCCTGGCCGAGGAACTCCAATGGGCATGCCCCCTCCTGGCATGCGGCCTCCTCCTCCAGGCATGCGAGGTCTGCTTTGATCTTCACACAGCATTATGTCAGTAGCTCAGAGGCGATGTGGACCCTGTTCCCCAGGGTCAGGTTACCACAgacctgtttgtttgttatgcAGTTCATGGAGTCTCCCTGGATTGTCTGGTTTCCCTTTCAGGGCTCCCTCCCTGGGAAATGTGCCCTCCAAGGCCCTAGACTCATCTTGGTTCTCCTCAGCTCCTTGCCTGTTTCCTTCCCAAAAGGCTGTATGTACATAGTCCTTTTTCTCTGTGGCCTATGAAGCTGGTTTATAATAAACTAAGAGACTGTTATACATACAGTTG