Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Snrpd1
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name small nuclear ribonucleoprotein D1
Also known as SMD1
Coordinate chr18:10617796-10628230
Strand +
Gene summary Predicted to enable RNA binding activity and U1 snRNP binding activity. Predicted to be involved in spliceosomal snRNP assembly. Predicted to act upstream of or within RNA splicing and mRNA processing. Located in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in connective tissue disease; nephritis; proteinuria; and systemic lupus erythematosus. Orthologous to human SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpd1

Retroname Coord Strand Genomic Region ENSG
Snrpd1P1 chr2:157010689-157011417 + Intragenic
 ENSMUSG00000084113 UCSC
Snrpd1P2 chr3:138349665-138349813 - Intergenic
 ENSMUSG00000105126 UCSC
Snrpd1P3 chr3:148897446-148897713 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_009226.4
GTCGCGCGTCCGCAGGCCTCCGCGCGCTTTTCCGGCCATTCATAACCCCAGTCCGTGGATCTCTGGAGCCTGAATTCTGTGAACAGTCGGGCCAGAAGGGAGAACTGCGTCGCTAGGATGAAGCTCGTGAGATTTTTGATGAAATTGAGTCATGAAACTGTAACCATTGAATTGAAGAATGGGACACAAGTCCATGGAACAATCACAGGTGTAGATGTCAGCATGAACACACACCTTAAAGCTGTGAAAATGACCctgaagaacagagaacctgTACAGTTGGAAACATTGAGTATTCGAGGCAATAACATTCGGTATTTTATTCTACCAGACAGCTTACCTCTAGATACACTACTTGTGGATGTTGAACCTAAGGTGAAGTCTAAGAAAAGAGAAGCTGTTGCAGGAAGAGGCCGAGGCCGGGGTAGAGGAAGAGGACGTGGTCGTGGCAGAGGAAGAGGGGGTCCTAGGCGATAATGTCTCTCAAGATTACTGTTTCAAATTGATAAGGAATTTGGGGATATCTTTTgtacaggttttgtttgtttgtcagttTTTAATAAACATAAGTGTAGGGACAGAGTTGTCTGTTGATTGTCAAATTAAAGTTGTAGTGAGTATCTACTATATTCACATAGTGTGTTCAGTTCGGGGAGTTGGACGCATGAAATACATATGTACTGAACATGGGTTTGATTTCTTTGAGTCCATTATTTGGGCCTCTTTTGAGATGAAATAAATTCTTGGCATTTCAATAAAGTTCTTTTGGGATGAGATCTAAAACTCACTCCATGGAGCTTTAGTGGTAAAAgcgaaaaataaatgattttgccTGGC