Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sod1
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name superoxide dismutase 1, soluble
Also known as B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1
Coordinate chr16:90017650-90023221
Strand +
Gene summary Enables superoxide dismutase activity. Involved in axonal transport; negative regulation of inflammatory response; and positive regulation of phagocytosis. Acts upstream of or within several processes, including hydrogen peroxide biosynthetic process; muscle cell cellular homeostasis; and neurogenesis. Located in extracellular space. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and sensory organ. Used to study amyotrophic lateral sclerosis type 1; dry eye syndrome; and low tension glaucoma. Human ortholog(s) of this gene implicated in several diseases, including Down syndrome; artery disease (multiple); eye disease (multiple); glucose metabolism disease (multiple); and neurodegenerative disease (multiple). Orthologous to human SOD1 (superoxide dismutase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sod1

Retroname Coord Strand Genomic Region ENSG
Sod1P2 chr15:13418508-13418960 - Intergenic
ENSMUSG00000115347 UCSC
Sod1P1 chr6:67182511-67183110 + Intergenic
ENSMUSG00000047905 UCSC

Expression

Transcript Sequences

>NM_011434.2
CGCGGTCCTTTCCTGCGGCGCCTTCCGTCCGTCGGCTTCTCGTCTTGCTCTCTCTGGTCCCTCCGGAGGAGGCCGCCGCGCGTCTCCCGGGGAAGCATGGCGATGAAAGCGGTGTGCGTGCTGAAGGGCGACGGTCCGGTGCAGGGAACCATCCACTTCGAGCAGAAGgcaAGCGGTGAACCAGTTGTGTTGTCAGGACAAATTACAGGATTAACTGAAGGCCAGCATGGGTTCCACGTCCATCAGTATGGGGACAATACACAAGGCTGTACCAGTGCAGGACCTCATTTTAATCCTCACTCTAAGAAACATGGTGGCCCGGCGGATGAAGAGAGGCATGTTGGAGACCTGGGCAATGTGACTGCTGGAAAGGACGGTGTGGCCAATGTGTCCATTGAAGATCGTGTGATCTCACTCTCAGGAGAGCATTCCATCATTGGCCGTACAATGGTGGTCCATGAGAAACAAGATGACTTGGGCAAAGGTGGAAATGAAGAAAGtacaaagactggaaatgctggGAGCCGCTTGGCCTGTGGAGTGATTGGGATTGCGCAGTAAACATTCCCTGTGTGGTCTGAGTCTCAGACTCATCTGCTACCCTCAAACCATTAAACTGTAATCTGAAGAGTTGTAA