Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sparc
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name secreted acidic cysteine rich glycoprotein
Also known as BM-40|ON
Coordinate chr11:55284985-55310906
Strand -
Gene summary Enables calcium ion binding activity and extracellular matrix binding activity. Acts upstream of or within several processes, including bone development; cellular response to growth factor stimulus; and pigmentation. Located in extracellular matrix and extracellular space. Is expressed in several structures, including alimentary system; extraembryonic component; genitourinary system; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in cervix carcinoma; endometrial carcinoma; and osteogenesis imperfecta type 17. Orthologous to human SPARC (secreted protein acidic and cysteine rich). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sparc

Retroname Coord Strand Genomic Region ENSG
SparcP1 chr1:123732127-123732342 - Intragenic
ENSMUSG00000101994 UCSC

Expression

Transcript Sequences

>NM_009242.5
AGGTGGGGCCAGGGTGTCTGGGTAGCACACAGCCTACCACAAggcaaggaagggagaaagaaaagacagcttTGGttctggggagaagggggaggcaggccaggggaaggaggagacagaggaggaggagggccttTGAGTGGAGGCGGAGGGTGAGACAGACCCTGCCCAGAGCTCCAAGAGGCTTCCTGCTGCTCGCCTCTAAACCCCTCCACATTCCTGCAGCCCTTCAGACCGCCAGAACTCTTctgccgcctgcctgcctgcctgcctgcctgcctgcctgtgccgaGAGTTCCCAGCATCATGAGGGCCTGgatcttctttctcctttgcctGGCCGGGAGGGCCCTGGCAGCCCCTCAGCAGACTGAAGTTGCTGAGGAGATAGTGGAGGAGGAAACCGTGGTGGAGGAGACAGGGGTACCTGTGGGTGCCAACCCAGTCCAGGTGGAAATGGGAGAATTTGAGGACGGTGCAGAGGAAACGGTCGAGGAGGTGGTGGCTGACAACCCCTGCCAGAACCATCATTGCAAACATGGCAAGGTGTGTGAGCTGGACGAGAGCAacacccccatgtgtgtgtgccaggaCCCCACCAGCTGCCCTGCTCCCATTGGCGAGTTTGAGAAGGTATGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGACCATGCAAATACATCGCCCCCTGCCTGGATTCCGAGCTGACTGAATTCCCTCTGCGCATGCGTGACTGGCTCAAAAATGTCCTGGTCACCTTGTACGAGAGAGATGAGGGCAACAACCTCCTCACTGAGAAGCAGAAGCTGCGTGTGAAGAAGATCCATGAGAATGAGAAGCGCCTGGAGGCTGGAGACCACCCCGTGGAGCTGTTGGCCCGAGACTTTGAGAAGAACTACAATATGTACATCTTCCCTGTCCACTGGCAGTTTGGCCAGCTGGATCAGCACCCTATTGATGGGTACCTGTCCCACACTGAGCTGGCCCCACTGCGCGCTCCCCTCATCCCCATGGAACATTGCACCACACGTTTCTTTGAGACCTGTGACCTAGACAACGACAAGTACATTGCCCTGGAGGAATGGGCCGGCTGCTTTGGCATCAAGGAGCAGGACATCAACAAGGATCTGGTGATCTAAGTTCACGCCTCCTGCTGCAGTCCTGAACTCTCTCCCTCTGATGTGTCCCCCCTCCCATTACCCCCTTGTTTAAAATGTTTGGATGGTTGGCTGTTCCGCCTGGGGATAAGGTGCTAACATAGATTTAACTGAATACATTAAcggtgctaaaaaaaaaaaaaaaacaaagtaagaaagaaaCTAGAACCCAAGTCACAGCATTTTCCCACATAACTCTGAGGCCATGGCCCATCCACAGCCTCCTGGTCCCCTGCACTACCCAGTGTCTCACTGGCTGTGTTGGAAACGGAGTTGCATAAGCTCACCGTCCACAAGCACGAGGAGATATCTCTagctttcatttctgttttgcaTTTGACTCTTAACACTCACCCAGACTCTGTGCTTATTTCATTTTGGGGGATGTGGGCTTTTTCCCCTGGTGGTTTGGAGTTAGGCAGAGGGAAGTTACAGACACAGGTACAAAATTTGGGTAAAGATGCTGTGAGACCTGAGGACCCACCagtcagaacccacatggcaagTCTTAGTAGCCTAGGTCAAGGAAAGACAGAATAATCCAGAGCTGTGGCACACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGACTCTTAGGGCGTTTCTTTCCATGTTTGGctgttggttttagttttggtgaGCCATGGGTGGGCCAGAACATCACTCAACTGCAATTGGGCTTTCAGGTTCTTGCCGGGAGCTCTAGGCACTGGGAGGCTGTTTCAGGAAAGTGAGACTCaagaggaagacagaaaaggTTGTAACGTAGAGGAAGTGAGACTGGTgaattggtttgatttttttcacatcTAGATGGCTGTCATAAAGTTTCTAGCATGTTCCCCctcacctctccccaccccctgccacttGAAACCTTCTACTAATCAAGAGAAACTTCCAAGCCAACGGAATGGTCAGATCTCACAGGCTGAGAAATTGTTCCCCTCCAAGCATTTCATGAAAAAGCTGCTTCTCATTAACCATGCAAACTCTCACAGCAATGTGAAGAGCTTGACAagtctttcaaaataaaaagtaacaacTTAGAAACGGCTGTCCTGTCCCGGGTGATGGTATGTGTGTCTTACTCTCCGGTGCTTCGTTTTCAGGTGTGCACAAACATGGCCATACTTGTGCACAGAAGCAAACACTCCATTGtgcttttatacacacacacatattcacacactcagACAGGGAAGATATGGCTCCTGTGAGCACTAATTTAACACATGAAGAAGCCAGTTCctgggctgggatgtagctcagttgataaagtgcttaccCAATATGAACAAAGCCCAGGTTCGATCGTCAGCGCAACCTAAGCTGGCTGTGGCAGTGAATGTTTGAAATCCCAGCCccaaggaggtagaggcaggacagTCAAAtgtc