Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Phaf1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name phagosome assembly factor 1
Also known as Lin-10|Lin10|RGD621098
Coordinate chr19:37179850-37207714
Strand +
Gene summary Enables PDZ domain binding activity and glutamate receptor binding activity. Involved in Golgi to plasma membrane protein transport. Located in dendrite; synaptic vesicle membrane; and trans-Golgi network. Orthologous to human PHAF1 (phagosome assembly factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Phaf1

Retroname Coord Strand Genomic Region ENSG
RGD621098P1 chr2:86546165-86547112 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_139040.1
CGGGGCTGCTGCCCGGGAGGTGAAGGGAGGTTAAGTGTGTTGTTGTGTTAGTGCTGCCGTCGCCGCCCGGGACGGAGCTGAGAGCCGGACGTCCGCAGGCTGACGAGAGCGGCCAGTCAGCAGCTGCGTGCTCTCCTCAGGCCGGGTCCTGTCTGCGCTGCCGCAGGGAGGCCGCCCGGCCCAGCGAACCGAACCAATGCTGGACCTGGAGGTGGTGCCTGAACGCTCTCTGGGGAACGAGCAATGGGAATTCACACTGGGAATGCCTCTGGCTCAGGCAGTAGCCATTCTTCAGAAGCACTGTCGCATCATCAAAAATGTCCAGGTTCTCTACAGTGAGCAGTCTCCTCTAAGCCATGACCTCATCCTTAACCTGACTCAAGACGGGATCAAGCTACTGTTTGATGCTTTCAATCAGAGACTTAAGGTGATTGAAGTTTATGACTTAACAAAAGTAAAGTTAAAGTATTGTGGAGTGCATTTTAACTCTCAGGCCATCGCTCCTACCATTGAGCAAATTGACCAGTCTTTTGGTGCAACCCATCCAGGAGTGTACAACTCTGCTGAGCAGCTCTTCCACCTCAACTTCAGAGGACTGTCTTTCTCTTTTCAGTTAGACTCATGGACGGAGGCTCCCAAGTATGAGCCCAATTTTGCCCATGGTCTAGCTTCTCTTCAGATACCCCATGGAGCAACTGTAAAACGAATGTACATCTATAGTGGAAACAGCCTCCAGGATACCAAGGCTCCTATGATGCCCCTGAGCTGTTTCCTGGGGAATGTATATGCTGAAAGTGTAGACGTTCTTCGAGACGGAACTGGACCCTCAGGGTTGCGACTTCGCTTGCTCGCTGCAGGTTGTGGACCCGGAGTATTGGCAGATGCCAAAATGAGAGTATTTGAGCGTGCGGTGTATTTTGGTGATTCTTGCCAAGATGTTCTTAGCATGCTTGGCTCTCCACACAAAGTCTTCTATAAATCTGAAGACAAGATGAAAATTCACTCTCCTTCCCCTCATAAACAAGTTCCATCCAAGTGCAATGACTACTTTTTTAACTATTTCACTCTTGGAGTGGACATCCTGTTTGATGCAAATACACACAAAGTGAAGAAGTTTGTCCTGCATACCAATTACCCTGGGCATTATAATTTTAACATTTACCACCGCTGTGAGTTCAAGATCCCACTAGCCATAAAGAAAGAAAATGCAGGTGGTCAAACCGAAATATGCACAACCTACAGCAAGTGGGACAGCATCCAGGAGCTTCTGGGCCATCCTGTGGAAAAGCCGGTTGTCTTGCACAGATCCTCATCCCCAAATAACACCAACCCATTTGGCTCTACATTCTGCTTTGGTCTTCAGCGGATGATCTTTGAGGTCATGCAGAACAACCACATTGCCTCAGTGACCCTGTATGGCCCCCCTAGGCCTGGTGCCCACCTGAGAACAGCAGAGCTGCCCTAAGGACTTCACTGTTTTCCCTCTGTCCATGGAACTGTGCATCACATCCAGCTCAGTGGGTCTCTGTGCCACCACCCTGTGTGTTTTCTTGGGCACCTTGGCAGTGTTGAAGGGCTGTGGGACTTTGGGTTTGGAAGGCTGAGTTTTCTGCCTTGGGACAGAGGACCCAGCTGTCCAAAGCCTGCTGTCGCCATGAGAGAACACAGTCTGCAAAGAGAAGCACAAACTTTGAGCCTGGATGAGGGCTCTCTTATTAACATGTAATAAAGGACACGCCAGCCCTGTCCTGCACATGAGGAAGACGGGGCTCTTTCTCTATCTAAGGACCTGTACCTAGGAGAGAACAGGGTCCTGCTTTTGGCCCGACATTGCCATGTGCTCACCTTAAGGTGAGCAGAGCAGATGTATAGCATGTCAGTAGTACTTGGTTGCAATATTTGCACTACATCCACTTTAGTTACTTGATGAGCTGGCTGTGGCTGGTGTGGCCCACTGCCCTTTCCTGTTTCTTCTGTGTGAGTGCTCCTTGCCATGCCCAGGTGGCATACCCAAGTGGTTGAAATACAGTTTTCTCCCAGGTATGTACCAGGCCT