Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snu13
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5)
Also known as FA-1|Fta1|Nhp2l1|Ssfa1
Coordinate chr15:81925546-81931799
Strand -
Gene summary Enables box C/D RNA binding activity. Involved in box C/D snoRNP assembly. Acts upstream of or within single fertilization. Part of box C/D RNP complex. Is expressed in head. Orthologous to human SNU13 (small nuclear ribonucleoprotein 13). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snu13

Retroname Coord Strand Genomic Region ENSG
Snu13P6 chr10:40209886-40211083 + Intergenic
ENSMUSG00000111788 UCSC
Snu13P7 chr11:27448953-27450355 + Intergenic
ENSMUSG00000081658 UCSC
Snu13P9 chr13:12749208-12750411 + Intergenic
ENSMUSG00000113448 UCSC
Snu13P10 chr13:86039849-86040852 + Intergenic
ENSMUSG00000114900 UCSC
Snu13P13 chr17:35173188-35173748 - Intergenic
ENSMUSG00000092557 UCSC
Snu13P1 chr2:14696919-14698066 - Intragenic
ENSMUSG00000082542 UCSC
Snu13P2 chr2:71242142-71243262 - Intragenic
ENSMUSG00000086846 UCSC
Snu13P3 chr3:50552523-50552985 - Intergenic
ENSMUSG00000103745 UCSC
Snu13P4 chr6:122272529-122273758 + Intergenic
ENSMUSG00000108090 UCSC
Snu13P5 chr9:48361590-48362842 + Intergenic
ENSMUSG00000063543 UCSC
Snu13P8 chr12:48092837-48094322 - Intergenic
N/A UCSC
Snu13P11 chr16:50836779-50837308 - Intergenic
N/A UCSC
Snu13P12 chr17:23485149-23485363 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_011482.4
GCTTCCTGCCGCTTCTGAAGTGATTTCCGCTCCTTTTTCCTGCGCGGCGTTTCAGTCCCTCTTGAGTTGGGCTGTCGTCGAGTCGCGGCGAGACCGGCGCACCGCAGCCATGACAGAGGCTGATGTGAATCCGAAGGCCTATCCCCTCGCAGATGCCCACCTCACCAAGAAGCTGCTGGACCTTGTTCAACAGTCATGTAACTACAAGCAGCTTCGGAAAGGAGCCAATGAAGCCACCAAAACCCTCAACAGAGGCATCTCTGAGTTCATTGTGATGGCAGCAGACGCTGAGCCCTTGGAGATCATCCTGCACCTCCCTCTGCTGTGCGAAGACAAGAATGTCCCCTACGTATTTGTGCGCTCCAAGCAGGCTTTAGGACGGGCGTGTGGCGTCTCCAGGCCAGTCATCGCCTGTTCTGTTACCATCAAAGAAGGCTCTCAACTAAAGCAGCAGATCCAGTCCATTCAGCAGTCTATTGAAAGGCTCTTGGTGTAGGCTGTGGCCTCTGCCCTTTCCTGTCTACTGCCACCCTGTTTGTGTATCATATTGTCTGTTAGCATGTACTATTTTCAACCAGTTACTATTATATTGTACTACATCTgcgttttatatttttatttttgtcttaataaggttatttttcaccatctcttcattctcttctaccataaaaaatgaaatgatagcTAGGACAGGTGAAAGGCAGAATGTCACCATTTAACAACAGGAAGAACCAGGAGAAACTTAAGCCAGGGACAGTGTATACTTTCATCTGCAAACTTATTCCACTGCGCAGGGTAGGATGACAGTGACCCTGGTCCCTTGTGCCTTTGATATAAGAGCTCCATAAATGTTACTGACACTGAGGAACTTCCTTTGGGTAgcagtctctccctccccttaTCATTTGAAGAAATTTGATGTTGGGCCTATGTCCGGGAGCCATTTATTAATGTCCTGTGTGTTTTTGATGTATGTAGTCTGATATTCTCCCATATCTGGGGCAGTATCAGTACAAAGGGATTCTGTGGAGATCGTGGCAATTTGCTGGAACTTACAGCAGAGACAGTGCTAGCAGGAAACATCCTCTCCTTGGTAAATGGGGATGTCTTATTGTGGAACCATTTGATGGCCGTGTTGGGAGCCCTTATCCTGTTCTTCCCACAGCGTGGGTCAGGTGTATTCTCCCTCACATGAAGAAAGTGATAACATGTTCATTATTGAGCATCCTAATAAATATGTTCATATTTCGTTTT