Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Supt4a
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SPT4A, DSIF elongation factor subunit
Also known as Supt4h|Supt4h1|Supt4h1a
Coordinate chr11:87628377-87634449
Strand +
Gene summary Predicted to enable RNA polymerase II complex binding activity and protein heterodimerization activity. Acts upstream of or within negative regulation of transcription elongation from RNA polymerase II promoter. Predicted to be located in nucleoplasm. Predicted to be part of DSIF complex. Is expressed in several structures, including genitourinary system; heart; liver; lung; and spleen. Orthologous to human SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Supt4a

Retroname Coord Strand Genomic Region ENSG
Supt4aP2 chr10:31289503-31290197 - Intergenic
ENSMUSG00000110960 UCSC
Supt4aP1 chr6:95216917-95217607 - Intergenic
ENSMUSG00000107934 UCSC

Expression

Transcript Sequences

>NM_009296.2
CTGTTTACTTCCTGCGGCTGGAGGAACCTGTGTTGTCGTATCGGTGAGGATGGCCCTGGAGACGGTACCAAAGGACCTGCGGCATCTGCGGGCTTGTTTGCTGTGCTCGTTAGTCAAGactATAGACCAGTTCGAATATGATGGGTGTGACAATTGCGATGCATACCTACAAATGAAGGGCAACAGAGAGATGGTTTATGACTGCACCAGCTCTTCATTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTTAAGCCAGGTGTATATGCTGTGTCCGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGCCTACAAATCCAGAGACACAGCAATAAAGACCTAGCTAGGTGCAGGCCATAGCATCTTGTTCTTCACTTCTGTACTTGTTTTCTTGTGGAACTAAACCGTGGGACCCCAAAGACTCCCCGCCCTCCATCTCCGAATCAGCAGACTCCACGAAAGCAGCACATCGGCCTTAAGTCATCTCACTTTCTCTGCCCACTGGTGAAGTGGGAGTGTCTGGGCGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATGCTGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGGCAGGACTTTGGTTCAAATACCAATAAAGCGAGCCTTTGGAACATACTTAAA