Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Csta1
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name cystatin A1
Also known as Csta
Coordinate chr16:35940316-35951559
Strand -
Gene summary Predicted to enable cysteine-type endopeptidase inhibitor activity and protease binding activity. Predicted to be involved in several processes, including keratinocyte differentiation; negative regulation of peptidase activity; and peptide cross-linking. Predicted to be located in several cellular components, including cornified envelope; extracellular space; and nucleoplasm. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in peeling skin syndrome. Orthologous to human CSTA (cystatin A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Csta1

Retroname Coord Strand Genomic Region ENSG
Csta1P1 chr18:42306295-42306806 + Intergenic
 ENSMUSG00000034339 UCSC

Expression

Transcript Sequences

>NM_001033239.3
CCCCATTCCCTCAGATACTGTGGTGATTAGACATTTCATAGGAGGAGTTTATGGATACCTTTAAAATCCTAAGTCTCCCTGCTTGCCAGATCATTTCTTCTCAGCATCCTGCCCAGCAAAGAAGCAACTTGTGATCAGAATGATACCCGGAGGCTTGACGGAGGCCAGACCTGCCACAGCAGAAGTCCAGGAGATTGCTGACCGGGTCAAAGCACAGCTCGAAGAGGAAACCAATGAGAAATATGAAATATTCAAAGCCGTTGAGTATAAAACTCAAGTTGTCGCTGGAGTCAATTACTTCATTAAGATGGATGTAGGGGGTGGTTGTTTCACCCACATAAAAGTCTTCAAGGATCTTTCTGGAAAGAATAATTTGGAACTTACTGGTTACCAGACTAACAAAACCGAGGATGATGAGCTGACCTACTTCTAAGCAGCAAATTCTAAAGTGACCTGATTCCTCTCATTGTAAACTGATTCGGCCATCAATAAAGAAATATTCTCCAAATAACTGTTTACTTCCCTTGTTTCTCAGTATTGTGTCAACCTTTACTTTGTAAACAATTGTTTTTAAACACGGATTGTTTCTTGAATTTGTACCCTCCTTGGGCAAGGGTAAtctctgtatcattccaatttttAATATACATGCTGCCAAAGAGGGCATAGTGTTCATGGTTCAGAGTAGAAGCTCCACAATAAGTGATTCCATCTAGAAACCTTATAAAGACTACGGCTCAGTTGCAACTGCATAAAGGATCTTATCATCCCTTCCTCACTGCAGGTGCACTGGTGGTTGTCAGGGAAGCTCACTCCTTGGTCCCTTCGGTTGCCCAGAACCCAGCATGTCAACTCTGCCttcatatttgaaaattaaatttgtattttacaAGTCATGTTTTAAAACAATCATAATGTTTAAAGAAGctgccctctccctttcccccatgCTTCCACTGCACTTGAGAGTCAGTTGCAGTGATTTTCCATCACCAACAAAGGCTTTCTGGTACTCAGTAGTGCAAATATTTGTGTGAGCTTCCCACGAGACCCTTCTCCTGCACAGCCAAAAACCAACAATCGAGACCAGGAAATGTACATTGATGACGCACTGACATCTAGTCTCCAGGTGCCACTCAAGCCTCTCAAATTGTTATAATAATGTAATTTTTGATAAAATGTagtaaaaaaaatagttttaaaatcacAGCATGGTCTTTCTTCCCACGAGTTAGGTtttcaaatgaaacacacatcctatgtattttaatatgccttaggcAGCATTATAGCTGGCAACTATCTACCCTCCAtaacccaagttattacttaGTTTCATCAGTACTGCCCATAAGACAGCCCTATGGGCCATGTTCTCTTGGCCTCTAGCCCATGacatctctctctcctcctgttcCTTCCTCGTGGTCTCTAGCCTGgggaaacctaaaccccaccgATGTCTCTTCTCCACaactattggctgctggcatctttatttaccaaataTAATTAAGTGGGGGCAGGGTCCCTTAGGGTATGTGCAGACTCCAAATCTTGGAGGTCAGCATTACAAtaaacagtaaaagacaaaacctcaacaatTCCCCCTTTTAGTCCAGGAGGGATTTGCACTAGTGAGTACCAGGATTCTAATAAAAGGCTCTTTTCTCTTAGATATAATTTGAACACAATTataacaattatgtaaattataaGGTATGATATACACTTATAACATCCAGTCCATCATATTTGACAATTTAGGTAAAGTATTCTGTGATTTATCCTAACttaaagactttagaattctgcacctaaaaaatgtttgatttttaacttttattaccaTTACAAAACCATCTTTTCAAGTCTAGAACATTTTCTTTAACGTTAAGCAACTTAAGTTCAGTTGTGAGATCATAATTAGTATATTCTTCCCTGTCAGAGATTTGAGAAGGAAGTAAATATTGCTTGAATATGTAGGAAGCACAAagacacagcttccaaaacttaaacaACTGGCAGAGACAGCTGACTGCCCGGACAACCCCCAATATTTCTTATAAAGTTGGAGCATCTGtgttcagccttctggcccagagaATCTGAGAGACCTTAAGTGAAGTGGAAATTATGAAGAACTAGTTTATTTTATCTTGGCAGAGCATAGCAGTTAACTATCCTGTGTTTGTTTGTCCTTTTTGGATGGTGttctgtctgtagatgaaattGGGGCATTTCTTGTCCAATGGCTAGCTTGTCACATTTGAGGCAACCCCATATGTAGGTAGTGATGTTCATTTCCTTCCTTGAAATGGATGGGagtactgtcaggagcagacatgtctcatAGTCAAAAGATCTATTATTTATGAAGTAACATTAAATGTTATAGTTTGTTGcttttgaagaccatctatctaCATATAGCATAACTGAATTGTTAAGCATTATTGTTTCTAGCTATTTACTACTTGAGTAACCTTGATAATACTTTATTGTAAATAACTACATTAGAGTCTAACATGATCATGAGTTTGACTGACTATTAACCTGTATTACTTaatcattttaaacattttgtaaTAGCAGCTGTTAaaaaggactgggtctaagccttgtattcttaaatgagcTGCATAGGCACTGtgcctatctaagagtaacaaaattaatttaaaattttgtatcaGTGCATAAAGATTTATACCAATAAAAACCTTAAACT