Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name Tcea1
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name transcription elongation factor A (SII) 1
Also known as S-II
Coordinate chr1:4927917-4968132
Strand +
Gene summary Predicted to enable DNA binding activity and zinc ion binding activity. Acts upstream of or within erythrocyte differentiation and positive regulation of transcription by RNA polymerase II. Located in nucleoplasm. Is expressed in several structures, including central nervous system; early conceptus; genitourinary system; lung; and spleen. Orthologous to human TCEA1 (transcription elongation factor A1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tcea1

Retroname Coord Strand Genomic Region ENSG
Tcea1P1 chr11:32860371-32861092 + Intergenic
 ENSMUSG00000081254 UCSC
Tcea1P3 chrX:165268607-165270025 + Intragenic
 ENSMUSG00000081875 UCSC
Tcea1P2 chr15:90766694-90768119 + Intergenic
 ENSMUSG00000067869 UCSC

Expression

Transcript Sequences

>NM_001159750.1
ACTTCTACTTTCCAGTCTCCTGCGATCGATTCGTAGTGCCTGTGTGGCGCGCGCGGTGCTTGACTGGCACGGCCTAGGGGGCGGAGCGCTTATCCCTGCCGCCGCGGGCCGGGTCTGTGAGGAAGGCCTAGGCCAGCGGCTTCGCGGCTTGTCCAACGTCCGCGCAGCTTCTCTCGCTTCCCGTCCGCTGTGGCCGGGCGAGGGGAGGCCTTCCGGAGCCATGGAGGACGAGGTGGTTCGCATTGCCAAGAAGATGGACAAAATGGTGCAGAAAAAGAATGCGGCTGGCGCATTGGATTTGCTGAAAGAGCTTAAGAATATTCCCATGACCCTAGAATTGCTACAGTCCACAAGAATTGGAATGTCTGTCAATGCCCTTCGCAAGCAGAGCACAGATGAAGAAGTCACCTCTCTAGCCAAGTCTCTCATCAAATCCTGGAAAAAATTATTAGATGGACCATCAACTGATAAAGaccctgaagaaaagaaaaaagagcctgCAATTTCATCACAGAATAGCCCTGAAGCAAGAGAAGAAAGTTCCAGCAGCAATGTAAGCAGCAGAAAGGATGAGACAAATGCTCGAGATACATATGTTTCATCTTTTCCTCGGGCACCAAGCACTTCTGATTCTGTGCGATTAAAATGTAGGGAGATGCTTGCTGCAGCTCTTCGGACAGGAGATGATTATGTTGCAATTGGAGCTGATGAAGAAGAACTGGGATCTCAGATTGAGGAAGCTATATATCAAGAAATAAGGAATACAGACATGAAATACAAAAACAGAGTACGAAGTAGGATATCAAATCTTAAAGATGCAAAGAATCCAAATTTAAGGAAAAATGTGCTGTGTGGGAATATTCCTCCTGATCTATTTGCTAGAATGACAGCAGAGGAAATGGCTAGTGATGAGCTCAAAGAGATGAGGAAAAACCTGACCAAAGAAGCCATCAGGGAGCATCAGATGGCCAAGACTGGTGGGACCCAGACTGACTTGTTCACTTGTGGCAAATGTAAAAAGAAGAACTGCACTTATACACAGGTGCAAACTCGTAGTGCTGATGAACCAATGACAACATTTGTTgtatgtaatgaatgtggaaatCGGTGGAAGTTCTGTTGAGTTTGGAAGAATTGGCAAAGTATCTGGACCATTAAGAAAAACTAATTTTGTAATTAGCTTTAAAATTAAGCCAGGCAACTCGTTTCCTTGCAAGTGAAATTTGTAAACAACATACATCTCATGGGTTGGTCTTTGTTGTTCACCTGACAGTCTGTCTTAAATGCCTTCTGTGGTCTCAGATCAGCTGGGAGACCATAAAATAATGATATaatgtgttgctttgtttttctctttcataagTTGATGttgcattttattaaatattaactttttatAGCCTAGAACACAAAAATTTTGTTGATCTGTTAATGCATAAAGATAAATTGCTTTTCTCATTGGTATGtacctaaacatgttaaaaggAAAAGGCATAATATAAATTTTTAGAGTTACCAAATGTAGTGTGTATTCCAATAGTATGTGGCCAGCTTATCAAAGTTGTGCACACAATTTGAACTAGCATATTACTTTACTCTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATCTCTTGCATCTGTGACTAACCACAgtgatcatttcttttatttctcatacatatataataccatTTTTTAATAGATTTTACTCTGAAAACGgacttggtttattttatttgactttgtGCTATATTTTAGTTTTATAGAACTCTGTTATAATTTCCTAAGCTTTTCATAAAGCCCACCACAGGTATACTTCTGATGAATTGTCCCCAATAGGAAGACATGCTATGAAGAAAATGTTAGTATCTTAGTAGAGTTCCTGGAGGCAGCATGACTGTACTTGCACTTGGAAACCTACTGACCAAGGATTAAGCCTGAGAACTGTGTAAATCATTAAGCTATGCTCTTTGTGTATGGAGGTTGCAAAAAAAGGCACCTCCTTTAGACTGAATCTTTTGTGCTGAAATTTTTCTTACATGATGATGTCAAGCCAGCTGAAATGTAGGCTGTAGCAAATAGTTTTACAAAACATATTTCACAAttaagttttactttttaaatgtgtcCCACTTGTTTTGCTAGTAATAAGCAGTGGTTTTCACATCGTCTTCCTGACACAGATGTTGTAATGCATATAGTAAAGGCCACTTTTATAAATTAAGTGCTTCTGCCTGTGTTCAGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTAGACCGTTTGTCATAACATGGAAAACAATATGTCCATGTTAAAAGGATTggtctgccgggcgtggtggcccacacctttaatcccagaactcgggaggcagaggcaggcggatttctgagtttgaggccagcctggtctacagagtgagttccaggacagccagggctatacagagaaaccctgtctcaacccccctcccccccccaaaaaaaagattgGTCCATGGATAATTTctgtcactttaaaaataaagtacagtTTGAAAGAATTAGTTTAAAAGTAATAAGGTTAAAATAGTCCCACTTTTAAGTGatccattttaaaatttgtaaatcaataaagttttttgttgttaaacata
>NM_001159751.1
GCTGCTGCTGCTCCGCGGGTATGGTGCTGAGGCTGCAGCGGGACGGATGACATCCTCTGTTCCTTGATTGGTCTGTGTGGATGTGTCCCTCGGTGTGTACCACTTTCCATCCCTTTGCTTCCACACTTGACCTCTCCAGCCAGCTTCACTTGAATCTCTTCTTCCAGACGCAGCAGGCTGGCGCATTGGATTTGCTGAAAGAGCTTAAGAATATTCCCATGACCCTAGAATTGCTACAGTCCACAAGAATTGGAATGTCTGTCAATGCCCTTCGCAAGCAGAGCACAGATGAAGAAGTCACCTCTCTAGCCAAGTCTCTCATCAAATCCTGGAAAAAATTATTAGATGGACCATCAACTGATAAAGaccctgaagaaaagaaaaaagagcctgCAATTTCATCACAGAATAGCCCTGAAGCAAGAGAAGAAAGTAGTTCCAGCAGCAATGTAAGCAGCAGAAAGGATGAGACAAATGCTCGAGATACATATGTTTCATCTTTTCCTCGGGCACCAAGCACTTCTGATTCTGTGCGATTAAAATGTAGGGAGATGCTTGCTGCAGCTCTTCGGACAGGAGATGATTATGTTGCAATTGGAGCTGATGAAGAAGAACTGGGATCTCAGATTGAGGAAGCTATATATCAAGAAATAAGGAATACAGACATGAAATACAAAAACAGAGTACGAAGTAGGATATCAAATCTTAAAGATGCAAAGAATCCAAATTTAAGGAAAAATGTGCTGTGTGGGAATATTCCTCCTGATCTATTTGCTAGAATGACAGCAGAGGAAATGGCTAGTGATGAGCTCAAAGAGATGAGGAAAAACCTGACCAAAGAAGCCATCAGGGAGCATCAGATGGCCAAGACTGGTGGGACCCAGACTGACTTGTTCACTTGTGGCAAATGTAAAAAGAAGAACTGCACTTATACACAGGTGCAAACTCGTAGTGCTGATGAACCAATGACAACATTTGTTgtatgtaatgaatgtggaaatCGGTGGAAGTTCTGTTGAGTTTGGAAGAATTGGCAAAGTATCTGGACCATTAAGAAAAACTAATTTTGTAATTAGCTTTAAAATTAAGCCAGGCAACTCGTTTCCTTGCAAGTGAAATTTGTAAACAACATACATCTCATGGGTTGGTCTTTGTTGTTCACCTGACAGTCTGTCTTAAATGCCTTCTGTGGTCTCAGATCAGCTGGGAGACCATAAAATAATGATATaatgtgttgctttgtttttctctttcataagTTGATGttgcattttattaaatattaactttttatAGCCTAGAACACAAAAATTTTGTTGATCTGTTAATGCATAAAGATAAATTGCTTTTCTCATTGGTATGtacctaaacatgttaaaaggAAAAGGCATAATATAAATTTTTAGAGTTACCAAATGTAGTGTGTATTCCAATAGTATGTGGCCAGCTTATCAAAGTTGTGCACACAATTTGAACTAGCATATTACTTTACTCTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATCTCTTGCATCTGTGACTAACCACAgtgatcatttcttttatttctcatacatatataataccatTTTTTAATAGATTTTACTCTGAAAACGgacttggtttattttatttgactttgtGCTATATTTTAGTTTTATAGAACTCTGTTATAATTTCCTAAGCTTTTCATAAAGCCCACCACAGGTATACTTCTGATGAATTGTCCCCAATAGGAAGACATGCTATGAAGAAAATGTTAGTATCTTAGTAGAGTTCCTGGAGGCAGCATGACTGTACTTGCACTTGGAAACCTACTGACCAAGGATTAAGCCTGAGAACTGTGTAAATCATTAAGCTATGCTCTTTGTGTATGGAGGTTGCAAAAAAAGGCACCTCCTTTAGACTGAATCTTTTGTGCTGAAATTTTTCTTACATGATGATGTCAAGCCAGCTGAAATGTAGGCTGTAGCAAATAGTTTTACAAAACATATTTCACAAttaagttttactttttaaatgtgtcCCACTTGTTTTGCTAGTAATAAGCAGTGGTTTTCACATCGTCTTCCTGACACAGATGTTGTAATGCATATAGTAAAGGCCACTTTTATAAATTAAGTGCTTCTGCCTGTGTTCAGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTAGACCGTTTGTCATAACATGGAAAACAATATGTCCATGTTAAAAGGATTggtctgccgggcgtggtggcccacacctttaatcccagaactcgggaggcagaggcaggcggatttctgagtttgaggccagcctggtctacagagtgagttccaggacagccagggctatacagagaaaccctgtctcaacccccctcccccccccaaaaaaaagattgGTCCATGGATAATTTctgtcactttaaaaataaagtacagtTTGAAAGAATTAGTTTAAAAGTAATAAGGTTAAAATAGTCCCACTTTTAAGTGatccattttaaaatttgtaaatcaataaagttttttgttgttaaacata
>NM_011541.4
ACTTCTACTTTCCAGTCTCCTGCGATCGATTCGTAGTGCCTGTGTGGCGCGCGCGGTGCTTGACTGGCACGGCCTAGGGGGCGGAGCGCTTATCCCTGCCGCCGCGGGCCGGGTCTGTGAGGAAGGCCTAGGCCAGCGGCTTCGCGGCTTGTCCAACGTCCGCGCAGCTTCTCTCGCTTCCCGTCCGCTGTGGCCGGGCGAGGGGAGGCCTTCCGGAGCCATGGAGGACGAGGTGGTTCGCATTGCCAAGAAGATGGACAAAATGGTGCAGAAAAAGAATGCGGCTGGCGCATTGGATTTGCTGAAAGAGCTTAAGAATATTCCCATGACCCTAGAATTGCTACAGTCCACAAGAATTGGAATGTCTGTCAATGCCCTTCGCAAGCAGAGCACAGATGAAGAAGTCACCTCTCTAGCCAAGTCTCTCATCAAATCCTGGAAAAAATTATTAGATGGACCATCAACTGATAAAGaccctgaagaaaagaaaaaagagcctgCAATTTCATCACAGAATAGCCCTGAAGCAAGAGAAGAAAGTAGTTCCAGCAGCAATGTAAGCAGCAGAAAGGATGAGACAAATGCTCGAGATACATATGTTTCATCTTTTCCTCGGGCACCAAGCACTTCTGATTCTGTGCGATTAAAATGTAGGGAGATGCTTGCTGCAGCTCTTCGGACAGGAGATGATTATGTTGCAATTGGAGCTGATGAAGAAGAACTGGGATCTCAGATTGAGGAAGCTATATATCAAGAAATAAGGAATACAGACATGAAATACAAAAACAGAGTACGAAGTAGGATATCAAATCTTAAAGATGCAAAGAATCCAAATTTAAGGAAAAATGTGCTGTGTGGGAATATTCCTCCTGATCTATTTGCTAGAATGACAGCAGAGGAAATGGCTAGTGATGAGCTCAAAGAGATGAGGAAAAACCTGACCAAAGAAGCCATCAGGGAGCATCAGATGGCCAAGACTGGTGGGACCCAGACTGACTTGTTCACTTGTGGCAAATGTAAAAAGAAGAACTGCACTTATACACAGGTGCAAACTCGTAGTGCTGATGAACCAATGACAACATTTGTTgtatgtaatgaatgtggaaatCGGTGGAAGTTCTGTTGAGTTTGGAAGAATTGGCAAAGTATCTGGACCATTAAGAAAAACTAATTTTGTAATTAGCTTTAAAATTAAGCCAGGCAACTCGTTTCCTTGCAAGTGAAATTTGTAAACAACATACATCTCATGGGTTGGTCTTTGTTGTTCACCTGACAGTCTGTCTTAAATGCCTTCTGTGGTCTCAGATCAGCTGGGAGACCATAAAATAATGATATaatgtgttgctttgtttttctctttcataagTTGATGttgcattttattaaatattaactttttatAGCCTAGAACACAAAAATTTTGTTGATCTGTTAATGCATAAAGATAAATTGCTTTTCTCATTGGTATGtacctaaacatgttaaaaggAAAAGGCATAATATAAATTTTTAGAGTTACCAAATGTAGTGTGTATTCCAATAGTATGTGGCCAGCTTATCAAAGTTGTGCACACAATTTGAACTAGCATATTACTTTACTCTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATCTCTTGCATCTGTGACTAACCACAgtgatcatttcttttatttctcatacatatataataccatTTTTTAATAGATTTTACTCTGAAAACGgacttggtttattttatttgactttgtGCTATATTTTAGTTTTATAGAACTCTGTTATAATTTCCTAAGCTTTTCATAAAGCCCACCACAGGTATACTTCTGATGAATTGTCCCCAATAGGAAGACATGCTATGAAGAAAATGTTAGTATCTTAGTAGAGTTCCTGGAGGCAGCATGACTGTACTTGCACTTGGAAACCTACTGACCAAGGATTAAGCCTGAGAACTGTGTAAATCATTAAGCTATGCTCTTTGTGTATGGAGGTTGCAAAAAAAGGCACCTCCTTTAGACTGAATCTTTTGTGCTGAAATTTTTCTTACATGATGATGTCAAGCCAGCTGAAATGTAGGCTGTAGCAAATAGTTTTACAAAACATATTTCACAAttaagttttactttttaaatgtgtcCCACTTGTTTTGCTAGTAATAAGCAGTGGTTTTCACATCGTCTTCCTGACACAGATGTTGTAATGCATATAGTAAAGGCCACTTTTATAAATTAAGTGCTTCTGCCTGTGTTCAGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTAGACCGTTTGTCATAACATGGAAAACAATATGTCCATGTTAAAAGGATTggtctgccgggcgtggtggcccacacctttaatcccagaactcgggaggcagaggcaggcggatttctgagtttgaggccagcctggtctacagagtgagttccaggacagccagggctatacagagaaaccctgtctcaacccccctcccccccccaaaaaaaagattgGTCCATGGATAATTTctgtcactttaaaaataaagtacagtTTGAAAGAATTAGTTTAAAAGTAATAAGGTTAAAATAGTCCCACTTTTAAGTGatccattttaaaatttgtaaatcaataaagttttttgttgttaaacata